RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 NXF1Q9UBU9 619 aaKnown RBP9.13□□□□□ -0.95
TMEM258-201ENST00000257262 GTF3C4Q9UKN8 822 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 CTNND2Q9UQB3 1225 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 USTQ9Y2C2 406 aa9.13□□□□□ -0.95
TMEM258-201ENST00000257262 NOTCH4Q99466 2003 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 BICDL2A1A5D9 508 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 GOLGA6L22H0YM25 854 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SLC16A3O15427 465 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ATP2C2O75185 946 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 LRRN2O75325 713 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TACC1O75410 805 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SOAT2O75908 522 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 CLSTN1O94985 981 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 HLA-DRAP01903 254 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 POU2F2P09086 479 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 WARSP23381 471 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 FSHRP23945 695 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 GNL1P36915 607 aaPredicted RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ALDH1A3P47895 512 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 CDH8P55286 799 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TSPY1Q01534 308 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SMARCB1Q12824 385 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ZNF699Q32M78 642 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 PABPC1LQ4VXU2 614 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ZNF667Q5HYK9 610 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TCERG1LQ5VWI1 586 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 KRT39Q6A163 491 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SPOPLQ6IQ16 392 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 GET4Q7L5D6 327 aaPredicted RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 OTOP3Q7RTS5 596 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 FILIP1Q7Z7B0 1213 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ZDHHC14Q8IZN3 488 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TDRD5Q8NAT2 981 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 OR6B3Q8NGW1 331 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ITFG1Q8TB96 612 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SPPL2BQ8TCT7 592 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 C2orf15Q8WU43 125 aaKnown RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 ZNF512Q96ME7 567 aaPredicted RBP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 CEP63Q96MT8 703 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 MYADMQ96S97 322 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 PKMYT1Q99640 499 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 CORO1BQ9BR76 489 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 SNX25Q9H3E2 840 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 TMEM8AQ9HCN3 771 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.95
TMEM258-201ENST00000257262 HSFX1Q9UBD0 423 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 LIMD1Q9UGP4 676 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 MUTYHQ9UIF7 546 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 YIPF1Q9Y548 306 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 NME7Q9Y5B8 376 aa9.12□□□□□ -0.95
TMEM258-201ENST00000257262 MUC3AQ02505 3323 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 MYBPHLA2RUH7 354 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 A8MXQ7 604 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PI4K2BG5E9Z4 385 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 STX10O60499 249 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 ASS1P00966 412 aaKnown RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 RHOP08100 348 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 HAPLN1P10915 354 aaPredicted RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 LAMP2P13473 410 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PCSK1P29120 753 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 GTF2H1P32780 548 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PIK3CAP42336 1068 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 RAP1GAPP47736 663 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 TUFMP49411 452 aaKnown RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 EPHB3P54753 998 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PSMC1P62191 440 aaKnown RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PAK1Q13153 545 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 CCDC142Q17RM4 750 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 MGAT5BQ3V5L5 792 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 DCAF17Q5H9S7 520 aaPredicted RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 IQCEQ6IPM2 695 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 FAM171BQ6P995 826 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 FOXR2Q6PJQ5 311 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SCARA5Q6ZMJ2 495 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 ELMOD1Q8N336 334 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 TAS1R2Q8TE23 839 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 TAF4BQ92750 862 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 MED15Q96RN5 788 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SEPT5Q99719 369 aaPredicted RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 LPIN3Q9BQK8 851 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SYT15Q9BQS2 421 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PI4K2AQ9BTU6 479 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SDCBP2Q9H190 292 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 DNAJC25Q9H1X3 360 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 SMYD3Q9H7B4 428 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 METTL14Q9HCE5 456 aaKnown RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 ABI2Q9NYB9 513 aaPredicted RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
TMEM258-201ENST00000257262 CDH9Q9ULB4 789 aa9.11□□□□□ -0.95
TMEM258-201ENST00000257262 PCDHB5Q9Y5E4 795 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms