RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SLC11A2P49281 568 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 SMTNL2Q2TAL5 461 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 SYNPO2Q9UMS6 1093 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 EGFRP00533 1210 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 RBM43Q6ZSC3 357 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 EFL1Q7Z2Z2 1120 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 FAM163AQ96GL9 167 aaPredicted RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 MTMR12Q9C0I1 747 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 TSR3Q9UJK0 312 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 SYCE1LA8MT33 242 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CCNJLQ8IV13 435 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 IPMKQ8NFU5 416 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 RMDN2Q96LZ7 410 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 PRG3Q9Y2Y8 225 aaPredicted RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 SUPT3HO75486 399 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 EPHB2P29323 1055 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 BFSP2Q13515 415 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 SKIV2LQ15477 1246 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 DNAL1Q4LDG9 190 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 OTUB1Q96FW1 271 aaPredicted RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 TMEM169Q96HH4 297 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 WDCPQ9H6R7 721 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 LATS2Q9NRM7 1088 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 CHCHD3Q9NX63 227 aaKnown RBP19.78■□□□□ 0.76
PTPRE-201ENST00000254667 TEKT2Q9UIF3 430 aa19.78■□□□□ 0.76
PTPRE-201ENST00000254667 FBXO21O94952 628 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 CD44P16070 742 aaKnown RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 PKN1Q16512 942 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 RARS2Q5T160 578 aaKnown RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 NBPF12Q5TAG4 269 aaPredicted RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 LRRC8EQ6NSJ5 796 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 FBXO16Q8IX29 292 aaPredicted RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 ARRDC4Q8NCT1 418 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 IDI2Q9BXS1 227 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 AP1G2O75843 785 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 CYP11B1P15538 503 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 SYCP2LQ5T4T6 812 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 MEI1Q5TIA1 1274 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 CBWD1Q9BRT8 395 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 SPATC1LQ9H0A9 340 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 PCMTD2Q9NV79 361 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 DDIT4Q9NX09 232 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 PRLRP16471 622 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 BCAT1P54687 386 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 CYP24A1Q07973 514 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 TWF1Q12792 350 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 PCSK7Q16549 785 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 ALG13Q9NP73 1137 aaKnown RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 SPATS2LQ9NUQ6 558 aaKnown RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 ABI2Q9NYB9 513 aaPredicted RBP19.77■□□□□ 0.76
PTPRE-201ENST00000254667 ARHGAP23Q9P227 1491 aa19.77■□□□□ 0.76
PTPRE-201ENST00000254667 DEPDC5O75140 1603 aa19.77■□□□□ 0.75
PTPRE-201ENST00000254667 M0QYT0 321 aa19.77■□□□□ 0.75
PTPRE-201ENST00000254667 NFIBO00712 420 aa19.77■□□□□ 0.75
PTPRE-201ENST00000254667 IRF1P10914 325 aa19.77■□□□□ 0.75
PTPRE-201ENST00000254667 TTC30BQ8N4P2 665 aa19.77■□□□□ 0.75
PTPRE-201ENST00000254667 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.75
PTPRE-201ENST00000254667 SGPL1O95470 568 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 LRG1P02750 347 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 PGK2P07205 417 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 GEMP55040 296 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 FKBP1CQ5VVH2 108 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 RNF168Q8IYW5 571 aaPredicted RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 FAM71DQ8N9W8 422 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 SHCBP1Q8NEM2 672 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 XPO6Q96QU8 1125 aaKnown RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 SEMA6BQ9H3T3 888 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 B3GAT3O94766 335 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 SYF2O95926 243 aaKnown RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 INPP5AQ14642 412 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 KYNUQ16719 465 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 PTRHD1Q6GMV3 140 aaKnown RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 DEFB132Q7Z7B7 95 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 CDR2LQ86X02 465 aaPredicted RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 AGR3Q8TD06 166 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 ARL8AQ96BM9 186 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 STAMBPL1Q96FJ0 436 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 A0A087X0T9 212 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 FAM228BP0C875 321 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 PGM1P36871 562 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 PGM5Q15124 567 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 KLK14Q9P0G3 267 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 COL5A2P05997 1499 aaPredicted RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 PXDNQ92626 1479 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 A0A0A6YYK5 440 aaPredicted RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 KLHL2O95198 593 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 C4orf33Q8N1A6 199 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 ICA1LQ8NDH6 482 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 ATP8B4Q8TF62 1192 aa19.76■□□□□ 0.75
PTPRE-201ENST00000254667 COL3A1P02461 1466 aaPredicted RBP19.76■□□□□ 0.75
PTPRE-201ENST00000254667 TMEM131LA2VDJ0 1609 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 KIF20BQ96Q89 1820 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 ARHGAP10A1A4S6 786 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 DCDC2CA8MYV0 355 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 STX18Q9P2W9 335 aaKnown RBP19.75■□□□□ 0.75
PTPRE-201ENST00000254667 VIL1P09327 827 aaKnown RBP19.75■□□□□ 0.75
PTPRE-201ENST00000254667 LHX1P48742 406 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 FAM117BQ6P1L5 589 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 OR9Q1Q8NGQ5 310 aa19.75■□□□□ 0.75
PTPRE-201ENST00000254667 TEKT4Q8WW24 435 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms