RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ABCB4P21439 1286 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 HOXD10P28358 340 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 CPOXP36551 454 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 KDSRQ06136 332 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 HIC1Q14526 733 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 HERC4Q5GLZ8 1057 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 LMBRD2Q68DH5 695 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 DYMQ7RTS9 669 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 ITIH5Q86UX2 942 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 OTUD5Q96G74 571 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 HAUS8Q9BT25 410 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 PALMDQ9NP74 551 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 BLOC1S4Q9NUP1 217 aa13.64□□□□□ -0.23
MSH2-201ENST00000233146 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
MSH2-201ENST00000233146 H3BNX3 289 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
MSH2-201ENST00000233146 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 RAG1P15918 1043 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
MSH2-201ENST00000233146 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
MSH2-201ENST00000233146 SPERTQ8NA61 448 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
MSH2-201ENST00000233146 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 ANAPC5Q9UJX4 755 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 POLIQ9UNA4 740 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 A0A1W2PPM1 405 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 M0R2N6 131 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 KMOO15229 486 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 SIN3BO75182 1162 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 HADHBP55084 474 aaKnown RBP13.63□□□□□ -0.23
MSH2-201ENST00000233146 CNGA3Q16281 694 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 CYP2A13Q16696 494 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 EDRF1Q3B7T1 1238 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 WDR45BQ5MNZ6 344 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 RHOT2Q8IXI1 618 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 SIX5Q8N196 739 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 GALNT4Q8N4A0 578 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 RASGRP4Q8TDF6 673 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 DNAJC18Q9H819 358 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 SQORQ9Y6N5 450 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 EMSYQ7Z589 1322 aa13.63□□□□□ -0.23
MSH2-201ENST00000233146 FOXD2O60548 495 aaPredicted RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 CALM1P0DP23 149 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 CALM2P0DP24 149 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 CALM3P0DP25 149 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 PTK6Q13882 451 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 C11orf63Q6NUN7 778 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 EGLN2Q96KS0 407 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 OLFM1Q99784 485 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 RTFDC1Q9BY42 306 aaPredicted RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 OLFML3Q9NRN5 406 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 LDHCP07864 332 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 LMNB1P20700 586 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 GPC3P51654 580 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 PTK7Q13308 1070 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 SIGIRRQ6IA17 410 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 RNF207Q6ZRF8 634 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 TSPAN14Q8NG11 270 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 SLC39A3Q9BRY0 314 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 KRBA1A5PL33 1030 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 NLRP6P59044 892 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 PRKD1Q15139 912 aaPredicted RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 NOP9Q86U38 636 aaKnown RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 ZNF512BQ96KM6 892 aaPredicted RBP13.62□□□□□ -0.23
MSH2-201ENST00000233146 ZFYVE28Q9HCC9 887 aa13.62□□□□□ -0.23
MSH2-201ENST00000233146 A0A1B0GTW7 788 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ALOX15BO15296 676 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TEX28O15482 410 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 RSL1D1O76021 490 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 FARP2O94887 1054 aaPredicted RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 CSE1LP55060 971 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 WASHC5Q12768 1159 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 RABGAP1LQ5R372 815 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SYDE1Q6ZW31 735 aaPredicted RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 GPR180Q86V85 440 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 FAM20CQ8IXL6 584 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ZC3H3Q8IXZ2 948 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 ESX1Q8N693 406 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TRIML2Q8N7C3 387 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TTC13Q8NBP0 860 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TBC1D15Q8TC07 691 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SLC2A11Q9BYW1 496 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SLC7A5P2Q9GIP4 190 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 THAP2Q9H0W7 228 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ARMT1Q9H993 441 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SOX13Q9UN79 622 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TNRQ92752 1358 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 CCDC194A0A1B0GVG4 234 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms