RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KCNK13Q9HB14 408 aa14.82□□□□□ -0.04
SF1-201ENST00000227503 LARSQ9P2J5 1176 aaKnown RBP14.82□□□□□ -0.04
SF1-201ENST00000227503 ZNF212Q9UDV6 495 aa14.82□□□□□ -0.04
SF1-201ENST00000227503 NOCTQ9UK39 431 aaKnown RBP14.82□□□□□ -0.04
SF1-201ENST00000227503 USTQ9Y2C2 406 aa14.82□□□□□ -0.04
SF1-201ENST00000227503 NEU2Q9Y3R4 380 aa14.82□□□□□ -0.04
SF1-201ENST00000227503 ACTL7BQ9Y614 415 aa14.82□□□□□ -0.04
SF1-201ENST00000227503 TXNDC9O14530 226 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
SF1-201ENST00000227503 PRPF4O43172 522 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■■■□□ 15.3
SF1-201ENST00000227503 PLA2G6O60733 806 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 COQ9O75208 318 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 MTA2O94776 668 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 FMO1Q01740 532 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 PDIA2Q13087 525 aaKnown RBP14.81□□□□□ -0.04
SF1-201ENST00000227503 ACCSQ96QU6 501 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 DEFB129Q9H1M3 183 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 C10orf88Q9H8K7 445 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 ZNF395Q9H8N7 513 aaPredicted RBP14.81□□□□□ -0.04
SF1-201ENST00000227503 FBXO28Q9NVF7 368 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 CCDC160A6NGH7 325 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 FCHO1O14526 889 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 ZNF862O60290 1169 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 MYL2P10916 166 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 KRT10P13645 584 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 VAV1P15498 845 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 SSTR1P30872 391 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 HSPA1LP34931 641 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 ARL4CP56559 192 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 CETN1Q12798 172 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 ALCAMQ13740 583 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 ACBD5Q5T8D3 534 aaPredicted RBP14.81□□□□□ -0.04
SF1-201ENST00000227503 CCDC62Q6P9F0 684 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 MIER3Q7Z3K6 550 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 LCA5Q86VQ0 697 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 TTC17Q96AE7 1141 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 KCNH7Q9NS40 1196 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 NDE1Q9NXR1 346 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 HSPBP1Q9NZL4 362 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
SF1-201ENST00000227503 ZHX2Q9Y6X8 837 aa14.81□□□□□ -0.04
SF1-201ENST00000227503 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
SF1-201ENST00000227503 YDJCA8MPS7 323 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
SF1-201ENST00000227503 KITP10721 976 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 MAPK4P31152 587 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 SFT2D3Q587I9 215 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 FAM71AQ8IYT1 594 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 XXYLT1Q8NBI6 393 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 RBM15BQ8NDT2 890 aaKnown RBP14.8□□□□□ -0.04
SF1-201ENST00000227503 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 MYOCOSA0A1B0GUC4 107 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 GOLGA8IPA6NC78 632 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 PMM2O15305 246 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 ZWINTO95229 277 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 BGNP21810 368 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 FUT4P22083 530 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 RARRES1P49788 294 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 HSD17B4P51659 736 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 HIRAP54198 1017 aaPredicted RBP14.8□□□□□ -0.04
SF1-201ENST00000227503 ATP13A4Q4VNC1 1196 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 STYK1Q6J9G0 422 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 EFCAB3Q8N7B9 438 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 NCSTNQ92542 709 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 ACSF2Q96CM8 615 aaPredicted RBP14.8□□□□□ -0.04
SF1-201ENST00000227503 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 HAPLN3Q96S86 360 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 SH2D3AQ9BRG2 576 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 TSSK1BQ9BXA7 367 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 TRIM55Q9BYV6 548 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 LOXHD1Q8IVV2 1947 aa14.8□□□□□ -0.04
SF1-201ENST00000227503 ITGA2BP08514 1039 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 RARBP10826 455 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 GZMAP12544 262 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 MCCD1P59942 119 aaPredicted RBP14.79□□□□□ -0.04
SF1-201ENST00000227503 GTF2BQ00403 316 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 ZFYVE27Q5T4F4 411 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 RGS9BPQ6ZS82 235 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 FAM160B2Q86V87 743 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 ZNF276Q8N554 614 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 IL31RAQ8NI17 732 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 SLCO2A1Q92959 643 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 SKA1Q96BD8 255 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 CFAP57Q96MR6 1250 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 MANSC1Q9H8J5 431 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 BLOC1S6Q9UL45 172 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 CLRN2A0PK11 232 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 ASLP04424 464 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 DLG1Q12959 904 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 TFDP1Q14186 410 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 RASA2Q15283 850 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 SYCP2LQ5T4T6 812 aa14.79□□□□□ -0.04
SF1-201ENST00000227503 C1QTNF12Q5T7M4 302 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms