RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Bex2Q9WTZ8 129 aa8.66□□□□□ -1.02
Trim40-203ENSMUST00000172711 Eml5Q8BQM8 1977 aa8.66□□□□□ -1.02
Trim40-203ENSMUST00000172711 Cnot1Q6ZQ08 2375 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Zscan25B2RX31 543 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Zfp384E9Q1A5 584 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Gmeb2P58929 530 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 CtscP97821 462 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 IdsQ08890 552 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Ccdc61Q3UJV1 511 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Sim2Q61079 657 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Slc20a1Q61609 681 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Cyp3a16Q64481 504 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 C1qtnf6Q6IR41 264 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 ManeaQ6NXH2 462 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Jade2Q6ZQF7 829 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Vtcn1Q7TSP5 283 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Tbx10Q810F8 385 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Depdc1bQ8BH88 529 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Agap1Q8BXK8 857 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Csgalnact2Q8C1F4 542 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Mettl3Q8C3P7 580 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Zfp113Q8C689 439 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Unc45bQ8CGY6 931 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Krt79Q8VED5 531 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 AjubaQ91XC0 547 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Mrpl9Q99N94 265 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Ankef1Q9D2J7 775 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Ndrg2Q9QYG0 371 aaKnown RBP8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Tnnt3Q9QZ47 272 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 PtprfA2A8L5 1898 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Cacna1bO55017 2327 aa8.65□□□□□ -1.02
Trim40-203ENSMUST00000172711 Gm7168A0AUV4 508 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ism1A2ATD1 454 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gm10110D3Z5M2 615 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 C4bpaP08607 469 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Myl4P09541 193 aaKnown RBP8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Msh3P13705 1091 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Serpinc1P32261 465 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Usp46P62069 366 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Prss48Q14B25 312 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Hepacam2Q4VAH7 463 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Trav8d-2Q5R1B6 112 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ctc1Q5SUQ9 1212 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ccdc57Q6PHN1 1016 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Pabpc4Q6PHQ9 660 aaKnown RBP8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 March6Q6ZQ89 909 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Fgd5Q80UZ0 1219 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ppp1r15bQ8BFW3 697 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Q8C4P0 716 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Tmem198bQ8CFU0 350 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ifi205aQ8CGE8 404 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Mill2Q8HWE5 355 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 D8Ertd738eQ8R1F0 94 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Olfr385Q8VGT1 312 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Pcdhb16Q91Y03 802 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Prpf6Q91YR7 941 aaKnown RBP8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Mtfr1Q99MB2 328 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ms4a4cQ9D3F6 226 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Dmrtc1Q9D9R7 182 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 PolhQ9JJN0 694 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Capn15Q9JLG8 1095 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Dnajb9Q9QYI6 222 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Tnfrsf10bQ9QZM4 381 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Dnajc12Q9R022 198 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 PrebQ9WUQ2 417 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Wnk2Q3UH66 2149 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Notch4P31695 1964 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gm45015A0A140LII9 184 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Lrrc38A2VDH3 298 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 9230113P08RikD3YWX3 137 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 9330159F19RikD3Z623 648 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gm4302E9PX25 294 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 GmlE9PX31 176 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Vmn2r71L7N2D8 855 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Opn1mwO35599 359 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gja1P23242 382 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Lmo2P25801 158 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Mcm5P49718 733 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Uchl4P58321 233 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Rab33aP97950 237 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Zfyve27Q3TXX3 415 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gm28047Q3US59 414 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Defb28Q3V2L0 89 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Slc27a5Q4LDG0 689 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Cpa2Q504N0 417 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 MlipQ5FW52 269 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Oca2Q62052 833 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Cacna2d2Q6PHS9 1154 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 E2f7Q6S7F2 904 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Ctdspl2Q8BG15 465 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Taf2Q8C176 1104 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Q8CC96 669 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Q8CDN1 933 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 CarfQ8VHI4 689 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Pcdha2Q91Y17 948 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Med15Q924H2 789 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Prl2c5Q9JLV9 222 aa8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Myh10Q61879 1976 aaKnown RBP8.64□□□□□ -1.03
Trim40-203ENSMUST00000172711 Gm2897K7N6T7 172 aa8.63□□□□□ -1.03
Trim40-203ENSMUST00000172711 Hmga1P17095 107 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms