RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Nr2f2P43135 414 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Trim71Q1PSW8 855 aaKnown RBP13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rnf10Q3UIW5 804 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Zbtb16Q3UQ17 673 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Bbof1Q3V079 533 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Fam183bQ5NC57 135 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Atp13a4Q5XF90 1193 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 PostnQ62009 838 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gpsm1Q6IR34 673 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rps9Q6ZWN5 194 aaKnown RBP13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Sh3d21Q7TSG5 549 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ppm1eQ80TL0 749 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Chn2Q80XD1 332 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tmem108Q8BHE4 574 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 SucoQ8C341 1250 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Samd3Q8C4H2 520 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Q8CC96 669 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ccdc17Q8CE13 565 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rell1Q8K2J7 272 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Hnrnpul1Q8VDM6 859 aaKnown RBP13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cyp2c70Q91W64 489 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Fads1Q920L1 447 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Dnaaf1Q9D2H9 634 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cfap53Q9D439 514 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Efhd1Q9D4J1 240 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Sv2aQ9JIS5 742 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ddx25Q9QY15 484 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Angptl2Q9R045 493 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tnni1Q9WUZ5 187 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 PapolbQ9WVP6 641 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Stk25Q9Z2W1 426 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ighv11-2A0A075B5R8 117 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ttc38A3KMP2 465 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ddx23D3Z0M9 819 aaKnown RBP13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm4307E9PZY4 289 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm4312K9J7E2 289 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Slc2a4P14142 509 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Serpinc1P32261 465 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rab33aP97950 237 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ccdc61Q3UJV1 511 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pde1cQ64338 706 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rnf139Q7TMV1 668 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Defb34Q7TNV8 81 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 CslQ80X68 466 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Iqcb1Q8BP00 598 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Dnai1Q8C0M8 701 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Strip2Q8C9H6 844 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Klhl11Q8CE33 709 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Usp15Q8R5H1 981 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ces1fQ91WU0 561 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pde6cQ91ZQ1 861 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Slc39a5Q9D856 535 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 PolhQ9JJN0 694 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 DexiQ9WUQ7 95 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Arhgef10Q8C033 1345 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Abca4O35600 2310 aa13.04□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Plce1Q8K4S1 2282 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Zfp40B1B1D3 796 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm5483B2RV77 97 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Abcb5B5X0E4 1255 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Hmga1P17095 107 aaKnown RBP13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gna14P30677 355 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gpr3P35413 330 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Stat4P42228 749 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Anxa5P48036 319 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 MylpfP97457 169 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Wbp2P97765 261 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Grm2Q14BI2 872 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 SpoplQ2M2N2 392 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cxcl17Q5UW37 119 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Serpinb6Q60854 378 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Dlg4Q62108 724 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tshz2Q68FE9 1030 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Abcf1Q6P542 837 aaKnown RBP13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Kdm1aQ6ZQ88 853 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ppp1r15bQ8BFW3 697 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 B3glctQ8BHT6 489 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Arid5bQ8BM75 1188 aaKnown RBP13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Brat1Q8C3R1 822 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 GanQ8CA72 597 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pcdhb2Q91Y00 799 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pcyox1Q9CQF9 505 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rpl4Q9D8E6 419 aaKnown RBP13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Q9D9D9 101 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 1700069L16RikQ9D9H5 109 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Zbtb22Q9Z0G7 638 aa13.03□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ttc13A0A1L1SSC7 844 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm10717D3Z1I8 228 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Spryd3E9Q9B3 442 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Chmp6P0C0A3 200 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Sdc2P43407 202 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Senp1P59110 640 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Psmc1P62192 440 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Irf7P70434 457 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 rp9P97762 213 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Zc3h18Q0P678 948 aaKnown RBP13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pik3r6Q3U6Q4 756 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Eri2Q5BKS4 688 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Oca2Q62052 833 aa13.02□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Sox11Q7M6Y2 395 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms