RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Tdpoz2Q717B2 364 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sh3tc2Q80VA5 1289 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Arfip2Q8K221 341 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rin1Q921Q7 763 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Mrps9Q9D7N3 390 aaKnown RBP12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kat2aQ9JHD2 830 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Caln1Q9JJG7 219 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tekt5G5E8A8 557 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 AmhP27106 555 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hmgb2P30681 210 aaKnown RBP12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ptk2P34152 1090 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Srebf2Q3U1N2 1130 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Fdxacb1Q3UY23 622 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 DeptorQ570Y9 409 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Grik1Q60934 836 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 NostrinQ6WKZ7 506 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ccnt2Q7TQK0 723 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc7a14Q8BXR1 771 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ttc39bQ8BYY4 617 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gpc5Q8CAL5 572 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nek8Q91ZR4 698 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Xpo7Q9EPK7 1087 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc13a1Q9JHI4 594 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sh2d3cQ9QZS8 854 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nr1h3Q9Z0Y9 445 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ambra1A2AH22 1300 aa12.13□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cyp2c69E9PXC3 491 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nrxn2E9Q7X7 1710 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Galnt4O08832 578 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Impa1O55023 277 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Klf1P46099 358 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cyp2c40P56657 491 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Actr2P61161 394 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Arl4cP61208 192 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PhbP67778 272 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Npas2P97460 816 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Neurl1bQ0MW30 546 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Wdr18Q4VBE8 431 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc9b2Q5BKR2 547 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 B3gnt3Q5JCS9 372 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tgoln2Q62314 363 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 B3glctQ8BHT6 489 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tcaf1Q8BNE1 924 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Taf5Q8C092 801 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Abhd8Q8R0P8 439 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rabep2Q91WG2 554 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pcdha2Q91Y17 948 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nme5Q99MH5 211 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ttc33Q9D6K7 262 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tmem174Q9DCX7 243 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tmod4Q9JLH8 345 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gcnt4E9Q649 455 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ptp4a2O70274 167 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 KitP05532 979 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Stmn2P55821 179 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Crnkl1P63154 690 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rasgrf2P70392 1189 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 GabpaQ00422 454 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 DselQ0VBN2 1207 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Atp4aQ64436 1033 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 HpseQ6YGZ1 535 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gpr151Q7TSN6 422 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ush1gQ80T11 461 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gpr150Q8BL07 427 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Snx30Q8CE50 437 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PygbQ8CI94 843 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trip10Q8CJ53 603 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tasp1Q8R1G1 420 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pofut2Q8VHI3 429 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Arhgef25Q9CWR0 618 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Scyl1Q9EQC5 806 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trpc5Q9QX29 975 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gadd45gQ9Z111 159 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Mcpt4P21812 246 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Foxp2P58463 714 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rpl22P67984 128 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm8773Q3UQ24 132 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Myl6Q60605 151 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Xlr3cQ61806 226 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Magea3Q6T340 320 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rimbp2Q80U40 1072 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Q8CD60 292 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Stxbp5Q8K400 1152 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Haus3Q8QZX2 570 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Psmd6Q99JI4 389 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cul2Q9D4H8 745 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tomm20lQ9D4V6 152 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rnf14Q9JI90 485 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Abt1Q9QYL7 269 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PodxlQ9R0M4 503 aa12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm42715A0A087WP63 3095 aaKnown RBP12.12□□□□□ -0.47
Col9a1-202ENSMUST00000088349 IqccA2ADZ8 418 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Adgrf2E9Q4J9 644 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Stx2Q00262 289 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kcnc2Q14B80 642 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ccdc127Q3TC33 260 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pdlim7Q3TJD7 457 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tmem63bQ3TWI9 832 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Soat1Q61263 540 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nuak1Q641K5 658 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms