RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ppp1r36D3Z0R2 411 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rpl21O09167 160 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Anxa8O35640 327 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Camk4P08414 469 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mark3Q03141 753 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Neurl1bQ0MW30 546 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Adamts18Q4VC17 1219 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm4952Q5FW57 296 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Arhgap29Q8CGF1 1266 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PygbQ8CI94 843 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Setd3Q91WC0 594 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tceal1Q921P9 165 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 4933428M09RikQ9D3X3 192 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 B3galt4Q9Z0F0 371 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm4846B2RWH8 538 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 CstaP56567 97 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tbc1d10aP58802 500 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PrkcbP68404 671 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Map4k1P70218 827 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 NxnP97346 435 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Smcr8Q3UMB5 935 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm29609Q3UU56 907 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tmem65Q4VAE3 234 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cage1Q5IR70 849 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Foxn1Q61575 648 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dpysl3Q62188 570 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ddx42Q810A7 929 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Vgll2Q8BGW8 322 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gtf3c2Q8BL74 907 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Prpf31Q8CCF0 499 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tmem132cQ8CEF9 1099 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fam49bQ921M7 324 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Med7Q9CZB6 233 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Clec4aQ9QZ15 238 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 2210011C24RikA0A087WQ89 206 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm379J3QQ19 296 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rab21P35282 222 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Taf1bP97358 586 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cdk16Q04735 496 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gsdmc4Q3TR54 480 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Prmt9Q3U3W5 846 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ugt3a1Q3UP75 523 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Srrm1Q52KI8 946 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Map3k7Q62073 579 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Zic5Q7TQ40 622 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Zfp120Q8BZW4 436 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mettl24Q8CCB5 363 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tpd52l2Q9CYZ2 220 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tmem68Q9D850 329 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mrpl4Q9DCU6 294 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rmdn1Q9DCV4 305 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rnf25Q9QZR0 456 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 B020011L13RikA0A087WQI7 412 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Unc5cO08747 931 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PigrO70570 771 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Myl1P05977 188 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Casp2P29594 452 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Elk3P41971 409 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Shox2P70390 331 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Npas2P97460 816 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 VcpQ01853 806 aaKnown RBP10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 ZufspQ3T9Z9 577 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Otud5Q3U2S4 566 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cyp3a11Q64459 504 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp2a3Q64518 1038 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gpd2Q64521 727 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tor1aip2Q8BYU6 502 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lrrc34Q9DAM1 415 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Capn7Q9R1S8 813 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Arih1Q9Z1K5 555 aa10.18□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Wdr95D3Z7A8 784 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Barx2O08686 283 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Foxm1O08696 760 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Hoxc10P31257 342 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 RenbpP82343 430 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pbxip1Q3TVI8 727 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Sh3gl3Q62421 347 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ccnt2Q7TQK0 723 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mcph1Q7TT79 822 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rbm12b1Q80YR9 836 aaKnown RBP10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Clec4gQ8BNX1 294 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Senp7Q8BUH8 1037 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ttc39bQ8BYY4 617 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tgif2lx2Q8K5B9 231 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 NonoQ99K48 473 aaKnown RBP10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nde1Q9CZA6 344 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gpatch1Q9DBM1 930 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Speer3W4VSP1 261 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ambra1A2AH22 1300 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Scgb2b21A0A087WQA9 112 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slfn8B1ARD8 910 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm20721E9Q2U8 318 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Raph1F2Z3U3 1266 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 BtkP35991 659 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tulp2P46686 562 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gad2P48320 585 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Psma2P49722 234 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pik3r5Q5SW28 871 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gstt2Q61133 244 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ugt1a1Q63886 535 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms