RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Mtif3Q9CZD5 276 aa22.24■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Dpysl5Q9EQF6 564 aa22.24■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Rcan3Q9JKK0 239 aa22.24■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Rev3lQ61493 3122 aa22.24■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Adamts20P59511 1906 aa22.24■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Igkv16-104A0A0B4J1I1 116 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Odc1P00860 461 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Gm5571P01639 130 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Lmo2P25801 158 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Prss55Q14BX2 321 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Bbof1Q3V079 533 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Zcchc2Q69ZB8 1166 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Slc39a10Q6P5F6 833 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Cpa4Q6P8K8 420 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tlr13Q6R5N8 991 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Znf12Q7TSI0 686 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Zdhhc19Q810M5 347 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Aste1Q8BIR2 672 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Nipal1Q8BMW7 416 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Gnl3Q8CI11 538 aaKnown RBP22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Rtn4rl1Q8K0S5 445 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tmprss4Q8VCA5 435 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Olfr805Q8VFI4 319 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Ackr4Q924I3 350 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 4931423N10RikQ9D4J9 382 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Pld1Q9Z280 1074 aa22.23■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Prdm12A2AJ77 365 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Znf568E9PYI1 671 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Vmn2r115E9Q0E7 857 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Aoc3O70423 765 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Akap3O88987 864 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Abcb1bP06795 1276 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Abcd1P48410 736 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Adcy5P84309 1262 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Dsg1aQ61495 1057 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tmem151bQ68FE7 561 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 MyorgQ69ZQ1 716 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Ttyh3Q6P5F7 524 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Mindy1Q76LS9 468 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Wdr3Q8BHB4 942 aaKnown RBP22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Slu7Q8BHJ9 585 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Sfxn1Q99JR1 322 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Mmel1Q9JLI3 765 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Rnf103Q9R1W3 683 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 MgamB5THE2 1827 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tmem215A7E1Z1 235 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Gm4846B2RWH8 538 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Usp35M0QWN7 1009 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Men1O88559 611 aaKnown RBP22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Fam167bP17257 162 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 PdgfbP31240 241 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 CtcfQ61164 736 aaKnown RBP22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Mapre1Q61166 268 aaKnown RBP22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Ltbp3Q61810 1268 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Fnip1Q68FD7 1165 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Zfp512bQ6PHP4 879 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 FsbpQ8BKE5 299 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Nop9Q8BMC4 636 aaKnown RBP22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Igsf8Q8R366 611 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Klhl20Q8VCK5 604 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Nmrk1Q91W63 195 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Pcyox1Q9CQF9 505 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Erp44Q9D1Q6 406 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Timp4Q9JHB3 224 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Rnf25Q9QZR0 456 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tnni1Q9WUZ5 187 aa22.22■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Adamts8P57110 905 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Abi2P62484 446 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Lrrc47Q505F5 581 aaKnown RBP22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Cntn2Q61330 1040 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tatdn1Q6P8M1 295 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Trim65Q8BFW4 522 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Calhm5Q8R100 309 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Tlr3Q99MB1 905 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Mms19Q9D071 1031 aa22.21■■□□□ 1.15
Ssbp4-201ENSMUST00000049908 Gm5580A0A0N4SVP8 411 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Abcb5B5X0E4 1255 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Nr1i3O35627 358 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Pik3caP42337 1068 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Cdh8P97291 799 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Specc1lQ2KN98 1118 aaKnown RBP22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Upf3bQ3ULL6 472 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 PostnQ62009 838 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Gpsm1Q6IR34 673 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Tmem164Q6PHN7 296 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Otop2Q80SX5 563 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Dnph1Q80VJ3 173 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 RragaQ80X95 313 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Ttc24Q8BYG0 334 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Brat1Q8C3R1 822 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Nxnl1Q8VC33 217 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Pde2aQ922S4 916 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Apopt1Q9CQW7 192 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Mgat4dQ9D4R2 373 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Slc22a17Q9D9E0 401 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Smg9Q9DB90 520 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Rassf7Q9DD19 359 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Cse1lQ9ERK4 971 aaKnown RBP22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 Sept5Q9Z2Q6 369 aa22.2■■□□□ 1.14
Ssbp4-201ENSMUST00000049908 2210011C24RikA0A087WQ89 206 aa22.19■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms