RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Foxn1Q61575 648 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tarsl2Q8BLY2 790 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ints6lQ8BND4 861 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tmem59Q9QY73 323 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Map7d3A2AEY4 876 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ext2P70428 718 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Meis2P97367 477 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hif1aQ61221 836 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dnajc8Q6NZB0 253 aaKnown RBP10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Usp27Q8CEG8 438 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Elp3Q9CZX0 547 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gstt4Q9D4P7 240 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rab11fip1Q9D620 645 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Bmp15Q9Z0L4 392 aa10.75□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Arhgef10Q8C033 1345 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 A630010A05RikA9C473 232 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Kpna6O35345 536 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fbxo39Q5NBU5 443 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Olfr670Q7TRP3 312 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Taf2Q8C176 1104 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sept11Q8C1B7 431 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Setdb2Q8C267 713 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ddx18Q8K363 660 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slf1Q8R3P9 1054 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Smyd3Q9CWR2 428 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Snx10Q9CWT3 201 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fam111aQ9D2L9 613 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ndufa13Q9ERS2 144 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm45208A0A140LJ36 292 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ppp1r36D3Z0R2 411 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Itgb5O70309 798 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ptprn2P80560 1001 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Neurl1bQ0MW30 546 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccdc127Q3TC33 260 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Agxt2Q3UEG6 513 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pla2g4dQ50L43 825 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CybbQ61093 570 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ccnt2Q7TQK0 723 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ckap2lQ7TS74 745 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 4932411N23RikQ8C0S0 470 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Proser2Q8C5R2 471 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Smtnl2Q8CI12 456 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 HpdlQ8K248 371 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lgi2Q8K4Z0 550 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 TcimQ9D915 106 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fut8Q9WTS2 575 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fgf15O35622 218 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 CrymO54983 313 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Klc1O88447 541 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 KitP05532 979 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Slc11a2P49282 568 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Abi3bpQ59IW6 1179 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mapre1Q61166 268 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Itih3Q61704 889 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 LbpQ61805 481 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gga2Q6P5E6 603 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mrgprb8Q7TN51 330 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Camta2Q80Y50 1208 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fam118bQ8C569 351 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sik2Q8CFH6 931 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Snx9Q91VH2 595 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fam49bQ921M7 324 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fuca2Q99KR8 461 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rabl3Q9D4V7 236 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Satl1Q9D5N8 744 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 H2afyQ9QZQ8 372 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Vav3Q9R0C8 847 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Plod3Q9R0E1 741 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Capn7Q9R1S8 813 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Efcab12V9GXH0 673 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Foxn2E9Q7L6 429 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Raph1F2Z3U3 1266 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 E2f6O54917 272 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hspa4lP48722 838 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gtf2bP62915 316 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Grm2Q14BI2 872 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 SpoplQ2M2N2 392 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Ankrd34bQ3UUF8 508 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Pick1Q62083 416 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm5414Q6IFZ8 552 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Frmd4aQ8BIE6 1020 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fip1l1Q9D824 581 aaKnown RBP10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cul3Q9JLV5 768 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cd97Q9Z0M6 818 aa10.74□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Gm7086A0A1W2P766 342 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Dhx35A2ACQ1 703 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lipo2D3YY49 398 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Vmn2r1O70410 912 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Apba3O88888 571 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Myl2P51667 166 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 VcpQ01853 806 aaKnown RBP10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mcm9Q2KHI9 1134 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 GsapQ3TCV3 858 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Abhd15Q5F2F2 459 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tpp2Q64514 1262 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Letm2Q7TNU7 480 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mical2Q8BML1 960 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rtp1Q8C8C1 263 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Kct2Q8K201 259 aa10.73□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 FktnQ8R507 461 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms