RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 ZufspQ3T9Z9 577 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Prkaa1Q5EG47 559 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Acvrl1Q61288 502 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Btnl9Q8BJE2 536 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Stxbp5Q8K400 1152 aaKnown RBP11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Iqsec1Q8R0S2 961 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 F11Q91Y47 624 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Syap1Q9D5V6 365 aa11.83□□□□□ -0.51
Topbp1-201ENSMUST00000035164 Fam171a2A2A699 822 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 MipepA6H611 711 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dusp8O09112 663 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Oog4Q4G0C7 502 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Adgrg6Q6F3F9 1165 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Exd1Q8CDF7 570 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Sh3kbp1Q8R550 709 aaKnown RBP11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Snap47Q8R570 413 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 SmtnQ921U8 923 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Sgf29Q9DA08 293 aaKnown RBP11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rilpl1Q9JJC6 406 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3173A6NAS3 172 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3020E9Q3J7 150 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm2897K7N6T7 172 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rps6ka3P18654 740 aaKnown RBP11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mcpt4P21812 246 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Casp2P29594 452 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Nub1P54729 614 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Map3k7clP58500 142 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ppm1jQ149T7 507 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Trim72Q1XH17 477 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ceacam5Q3UKK2 947 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 CcnyQ8BGU5 341 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3411Q8C7R2 150 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rilpl2Q99LE1 197 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dgcr8Q9EQM6 773 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 GabreA2AMW3 916 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lipo2D3YY49 398 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Apol11aE9PZG0 334 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Usp17ldG5E8G2 545 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Usp17lcG5E8I7 545 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm3264L7N2C5 238 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rpl10aP53026 217 aaKnown RBP11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 PolgP54099 1218 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Igsf9Q05BQ1 1179 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Hace1Q3U0D9 909 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gm4952Q5FW57 296 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dpysl3Q62188 570 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ripor1Q68FE6 1223 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ttc8Q8VD72 515 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ak5Q920P5 562 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rab11fip1Q9D620 645 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Chmp2aQ9DB34 222 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ptgdr2Q9Z2J6 382 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Myh11O08638 1972 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gbp6A0A0G2JDV3 611 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ttll6A4Q9E8 822 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Usp17lbE9Q9U0 468 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 VcpQ01853 806 aaKnown RBP11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Smcr8Q3UMB5 935 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Heatr9Q5QNV8 569 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr390Q8VEZ7 311 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ccr10Q9JL21 362 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rasgrp2Q9QUG9 608 aa11.83□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Golgb1E9PVZ8 3238 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mageb4A2A9R3 556 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pcdh10E9PXQ7 1057 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Apba3O88888 571 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Krt10P02535 570 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Serpina1aP07758 413 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Serpina1cQ00896 412 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Serpina1dQ00897 413 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Tdpoz2Q717B2 364 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ip6k2Q80V72 448 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Polr3fQ921X6 316 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Akr1e2Q9DCT1 301 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 PdgfaP20033 211 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ccnd2P30280 289 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Gata5P97489 404 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Brd9Q3UQU0 596 aaKnown RBP11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rbl2Q64700 1135 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fam102aQ78T81 392 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Rnf139Q7TMV1 668 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slc4a7Q8BTY2 1034 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Kiaa0319lQ8K135 1048 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Olfr1499Q8VG65 314 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Mrpl11Q9CQF0 192 aaKnown RBP11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Prl2b1Q9DAZ2 228 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Fundc1Q9DB70 155 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pik3r2O08908 722 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Slc24a2Q14BI1 711 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lrrn4clQ3TYX2 239 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Skap1Q3UUV5 355 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Dcun1d2Q8BZJ7 259 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Utp11Q9CZJ1 253 aaKnown RBP11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Lima1Q9ERG0 753 aaKnown RBP11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Ccdc8D3YZV8 685 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Cyp4f17G3UW78 524 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Pms2P54279 859 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Edem3Q2HXL6 931 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 Q3UTZ3 580 aa11.82□□□□□ -0.52
Topbp1-201ENSMUST00000035164 SnrpaQ62189 287 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 48.1 ms