RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 MAG1P22134 296 aaKnown RBP-1.05□□□□□ -2.58
snR49snR49 HYP2P23301 157 aaKnown RBP-1.05□□□□□ -2.58
snR49snR49 CNB1P25296 175 aa-1.05□□□□□ -2.58
snR49snR49 NTG1P31378 399 aa-1.05□□□□□ -2.58
snR49snR49 CPR5P35176 225 aa-1.05□□□□□ -2.58
snR49snR49 SRX1P36077 127 aa-1.05□□□□□ -2.58
snR49snR49 FYV4P38783 130 aaPredicted RBP-1.05□□□□□ -2.58
snR49snR49 LIA1P47120 325 aaKnown RBP-1.05□□□□□ -2.58
snR49snR49 YDL157CQ12082 118 aa-1.05□□□□□ -2.58
snR49snR49 ATG31Q12421 196 aa-1.05□□□□□ -2.58
snR49snR49 MDN1Q12019 4910 aaKnown RBP-1.05□□□□□ -2.58
snR49snR49 SPS2P08459 502 aa-1.06□□□□□ -2.58
snR49snR49 PRP18P33411 251 aaPredicted RBP-1.06□□□□□ -2.58
snR49snR49 MRPL11P36521 249 aaPredicted RBP-1.06□□□□□ -2.58
snR49snR49 YBR016WP38216 128 aa-1.06□□□□□ -2.58
snR49snR49 CSH1P38287 376 aa-1.06□□□□□ -2.58
snR49snR49 CUE1P38428 203 aa-1.06□□□□□ -2.58
snR49snR49 TRM5P38793 499 aa-1.06□□□□□ -2.58
snR49snR49 AIM2P39721 246 aa-1.06□□□□□ -2.58
snR49snR49 NSA2P40078 261 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 YNL200CP40165 246 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 YGL101WP53144 215 aa-1.06□□□□□ -2.58
snR49snR49 LSM7P53905 115 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 VPS28Q02767 242 aa-1.06□□□□□ -2.58
snR49snR49 YMR315WQ04869 349 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 NMA1Q06178 401 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 RUD3Q12234 484 aaKnown RBP-1.06□□□□□ -2.58
snR49snR49 YML100W-AQ8TGT0 57 aa-1.06□□□□□ -2.58
snR49snR49 SAC3P46674 1301 aa-1.07□□□□□ -2.58
snR49snR49 TY4B-JP47024 1803 aa-1.07□□□□□ -2.58
snR49snR49 RPL40AP0CH08 128 aaKnown RBP-1.07□□□□□ -2.58
snR49snR49 RPL40BP0CH09 128 aaKnown RBP-1.07□□□□□ -2.58
snR49snR49 SEC14P24280 304 aaKnown RBP-1.07□□□□□ -2.58
snR49snR49 SUA7P29055 345 aaPredicted RBP-1.07□□□□□ -2.58
snR49snR49 MRPL37P36532 105 aa-1.07□□□□□ -2.58
snR49snR49 RTT105P40063 208 aa-1.07□□□□□ -2.58
snR49snR49 LST8P41318 303 aa-1.07□□□□□ -2.58
snR49snR49 VPS55P47111 140 aa-1.07□□□□□ -2.58
snR49snR49 TDA4P47153 279 aa-1.07□□□□□ -2.58
snR49snR49 BRR6P53062 197 aa-1.07□□□□□ -2.58
snR49snR49 EGD1Q02642 157 aaKnown RBP-1.07□□□□□ -2.58
snR49snR49 EST3Q03096 181 aa-1.07□□□□□ -2.58
snR49snR49 YML079WQ03629 201 aa-1.07□□□□□ -2.58
snR49snR49 PAM18Q07914 168 aa-1.07□□□□□ -2.58
snR49snR49 YOR385WQ08909 290 aa-1.07□□□□□ -2.58
snR49snR49 MHF1Q3E835 90 aa-1.07□□□□□ -2.58
snR49snR49 YSF3P0C074 85 aaPredicted RBP-1.08□□□□□ -2.58
snR49snR49 COX23P38824 151 aa-1.08□□□□□ -2.58
snR49snR49 CYC2P38909 366 aa-1.08□□□□□ -2.58
snR49snR49 SRP14P38985 146 aa-1.08□□□□□ -2.58
snR49snR49 YEL073CP39974 107 aa-1.08□□□□□ -2.58
snR49snR49 HMF1P40037 129 aaKnown RBP-1.08□□□□□ -2.58
snR49snR49 ICS3P47034 131 aa-1.08□□□□□ -2.58
snR49snR49 XPT1P47165 209 aa-1.08□□□□□ -2.58
snR49snR49 MIC26P50087 233 aa-1.08□□□□□ -2.58
snR49snR49 SBH1P52870 82 aa-1.08□□□□□ -2.58
snR49snR49 YGR164WP53291 111 aa-1.08□□□□□ -2.58
snR49snR49 NRK1P53915 240 aa-1.08□□□□□ -2.58
snR49snR49 COF1Q03048 143 aaKnown RBP-1.08□□□□□ -2.58
snR49snR49 FUS2Q05670 677 aa-1.08□□□□□ -2.58
snR49snR49 YBR072C-AQ3E794 53 aa-1.08□□□□□ -2.58
snR49snR49 KTI11Q3E840 82 aa-1.08□□□□□ -2.58
snR49snR49 YRF1-3P0CX14 1859 aa-1.08□□□□□ -2.58
snR49snR49 YRF1-7P0CX15 1859 aa-1.08□□□□□ -2.58
snR49snR49 PMD1P32634 1753 aa-1.08□□□□□ -2.58
snR49snR49 TY4B-HP0C2J7 1802 aa-1.09□□□□□ -2.58
snR49snR49 MBF1O14467 151 aaKnown RBP-1.09□□□□□ -2.58
snR49snR49 MER1P16523 270 aa-1.09□□□□□ -2.58
snR49snR49 PEX34P25584 144 aa-1.09□□□□□ -2.58
snR49snR49 EMP24P32803 203 aaKnown RBP-1.09□□□□□ -2.58
snR49snR49 UTP11P34247 250 aaPredicted RBP-1.09□□□□□ -2.58
snR49snR49 PET100P38958 111 aa-1.09□□□□□ -2.58
snR49snR49 COX15P40086 486 aa-1.09□□□□□ -2.58
snR49snR49 FYV6P53913 173 aa-1.09□□□□□ -2.58
snR49snR49 GPI11Q06636 219 aa-1.09□□□□□ -2.58
snR49snR49 YIL134C-AQ45U18 67 aa-1.09□□□□□ -2.58
snR49snR49 YLR255CO13574 117 aa-1.1□□□□□ -2.59
snR49snR49 GCY1P14065 312 aaKnown RBP RIP-Chip data-1.1□□□□□ -2.59not detected
snR49snR49 GCN3P14741 305 aa-1.1□□□□□ -2.59
snR49snR49 NMT1P14743 455 aa-1.1□□□□□ -2.59
snR49snR49 MRPL25P23369 157 aa-1.1□□□□□ -2.59
snR49snR49 HSP30P25619 332 aa-1.1□□□□□ -2.59
snR49snR49 YCR087C-AP37263 153 aa-1.1□□□□□ -2.59
snR49snR49 NQM1P53228 333 aaPredicted RBP-1.1□□□□□ -2.59
snR49snR49 YNL019CP53975 284 aa-1.1□□□□□ -2.59
snR49snR49 RUB1Q03919 77 aa-1.1□□□□□ -2.59
snR49snR49 YPR114WQ06107 315 aa-1.1□□□□□ -2.59
snR49snR49 SYM1Q06563 197 aa-1.1□□□□□ -2.59
snR49snR49 RFU1Q08003 200 aa-1.1□□□□□ -2.59
snR49snR49 YLR412C-AQ3E742 68 aa-1.1□□□□□ -2.59
snR49snR49 TOR1P35169 2470 aa-1.11□□□□□ -2.59
snR49snR49 FUN14P18411 198 aa-1.11□□□□□ -2.59
snR49snR49 FES1P38260 290 aa-1.11□□□□□ -2.59
snR49snR49 YNL198CP40166 100 aa-1.11□□□□□ -2.59
snR49snR49 RPC17P47076 161 aa-1.11□□□□□ -2.59
snR49snR49 HHO1P53551 258 aa-1.11□□□□□ -2.59
snR49snR49 PLP1Q04004 230 aa-1.11□□□□□ -2.59
snR49snR49 THI74Q04083 370 aa-1.11□□□□□ -2.59
snR49snR49 IRC19Q07843 230 aa-1.11□□□□□ -2.59
snR49snR49 RPO41P13433 1351 aaKnown RBP-1.11□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms