RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B NRK1P53915 240 aa-1.3□□□□□ -2.62
snR39BsnR39B FUS2Q05670 677 aa-1.3□□□□□ -2.62
snR39BsnR39B YLR036CQ07986 203 aa-1.3□□□□□ -2.62
snR39BsnR39B GCY1P14065 312 aaKnown RBP RIP-Chip data-1.31□□□□□ -2.62not detected
snR39BsnR39B TRM5P38793 499 aa-1.31□□□□□ -2.62
snR39BsnR39B GEP7P53171 287 aa-1.31□□□□□ -2.62
snR39BsnR39B IRC21Q04772 201 aa-1.31□□□□□ -2.62
snR39BsnR39B RUD3Q12234 484 aaKnown RBP-1.31□□□□□ -2.62
snR39BsnR39B YKL183C-AQ3E765 70 aa-1.31□□□□□ -2.62
snR39BsnR39B RPS24AP0CX31 135 aaKnown RBP-1.32□□□□□ -2.62
snR39BsnR39B RPS24BP0CX32 135 aaKnown RBP-1.32□□□□□ -2.62
snR39BsnR39B CPR5P35176 225 aa-1.32□□□□□ -2.62
snR39BsnR39B MIC12P38341 106 aa-1.32□□□□□ -2.62
snR39BsnR39B FYV4P38783 130 aaPredicted RBP-1.32□□□□□ -2.62
snR39BsnR39B YEL014CP39999 101 aa-1.32□□□□□ -2.62
snR39BsnR39B FIP1P45976 327 aa-1.32□□□□□ -2.62
snR39BsnR39B FIT3Q08907 204 aa-1.32□□□□□ -2.62
snR39BsnR39B YLR412C-AQ3E742 68 aa-1.32□□□□□ -2.62
snR39BsnR39B THP2O13539 261 aaKnown RBP-1.33□□□□□ -2.62
snR39BsnR39B RPL33AP05744 107 aaKnown RBP-1.33□□□□□ -2.62
snR39BsnR39B VMA6P32366 345 aaKnown RBP-1.33□□□□□ -2.62
snR39BsnR39B FMC1P40491 155 aa-1.33□□□□□ -2.62
snR39BsnR39B YFR035CP43608 114 aa-1.33□□□□□ -2.62
snR39BsnR39B YDL241WQ07738 123 aa-1.33□□□□□ -2.62
snR39BsnR39B YLR031WQ07978 186 aa-1.33□□□□□ -2.62
snR39BsnR39B SPS2P08459 502 aa-1.34□□□□□ -2.62
snR39BsnR39B HYP2P23301 157 aaKnown RBP-1.34□□□□□ -2.62
snR39BsnR39B PRP18P33411 251 aaPredicted RBP-1.34□□□□□ -2.62
snR39BsnR39B YNL200CP40165 246 aaKnown RBP-1.34□□□□□ -2.62
snR39BsnR39B POR2P40478 281 aa-1.34□□□□□ -2.62
snR39BsnR39B YML079WQ03629 201 aa-1.34□□□□□ -2.62
snR39BsnR39B YLR194CQ05777 254 aa-1.34□□□□□ -2.62
snR39BsnR39B SEC14P24280 304 aaKnown RBP-1.35□□□□□ -2.63
snR39BsnR39B HSP30P25619 332 aa-1.35□□□□□ -2.63
snR39BsnR39B CDC39P25655 2108 aaKnown RBP-1.35□□□□□ -2.63
snR39BsnR39B BUB2P26448 306 aaPredicted RBP-1.35□□□□□ -2.63
snR39BsnR39B RME1P32338 300 aaKnown RBP-1.35□□□□□ -2.63
snR39BsnR39B ARO80Q04052 950 aa-1.35□□□□□ -2.63
snR39BsnR39B YDR010CQ12426 110 aa-1.35□□□□□ -2.63
snR39BsnR39B RSF2P46974 1380 aa-1.35□□□□□ -2.63
snR39BsnR39B SEN1Q00416 2231 aaKnown RBP-1.36□□□□□ -2.63
snR39BsnR39B MRS1P07266 363 aa-1.36□□□□□ -2.63
snR39BsnR39B YBR121C-AP0C5L4 52 aa-1.36□□□□□ -2.63
snR39BsnR39B INO4P13902 151 aa-1.36□□□□□ -2.63
snR39BsnR39B YCR016WP25617 290 aaKnown RBP-1.36□□□□□ -2.63
snR39BsnR39B CSH1P38287 376 aa-1.36□□□□□ -2.63
snR39BsnR39B MEC1P38111 2368 aa-1.36□□□□□ -2.63
snR39BsnR39B DYN1P36022 4092 aa-1.37□□□□□ -2.63
snR39BsnR39B YPT31P38555 223 aaKnown RBP-1.37□□□□□ -2.63
snR39BsnR39B IPI1P38803 334 aaPredicted RBP-1.37□□□□□ -2.63
snR39BsnR39B IPT1P38954 527 aa-1.37□□□□□ -2.63
snR39BsnR39B YEL073CP39974 107 aa-1.37□□□□□ -2.63
snR39BsnR39B YNL194CP40169 301 aa-1.37□□□□□ -2.63
snR39BsnR39B TMA22P47089 198 aaPredicted RBP-1.37□□□□□ -2.63
snR39BsnR39B EMC4P53073 190 aa-1.37□□□□□ -2.63
snR39BsnR39B YNL190WP53872 204 aa-1.37□□□□□ -2.63
snR39BsnR39B YGL014C-AP0C5N1 53 aa-1.38□□□□□ -2.63
snR39BsnR39B ECM31P38122 312 aa-1.38□□□□□ -2.63
snR39BsnR39B YBR013CP38215 129 aa-1.38□□□□□ -2.63
snR39BsnR39B YNL184CP53876 108 aa-1.38□□□□□ -2.63
snR39BsnR39B PET117Q02771 107 aa-1.38□□□□□ -2.63
snR39BsnR39B BRR2P32639 2163 aaKnown RBP-1.39□□□□□ -2.63
snR39BsnR39B CWC23P52868 283 aaPredicted RBP-1.39□□□□□ -2.63
snR39BsnR39B NQM1P53228 333 aaPredicted RBP-1.39□□□□□ -2.63
snR39BsnR39B PGA1P53896 198 aa-1.39□□□□□ -2.63
snR39BsnR39B YMR122CQ03879 124 aa-1.39□□□□□ -2.63
snR39BsnR39B YHR050W-AQ05451 56 aa-1.39□□□□□ -2.63
snR39BsnR39B BRX1Q08235 291 aaKnown RBP-1.39□□□□□ -2.63
snR39BsnR39B RDI1Q12434 202 aa-1.39□□□□□ -2.63
snR39BsnR39B YJR128WP47162 119 aa-1.4□□□□□ -2.63
snR39BsnR39B MIC27P50945 234 aa-1.4□□□□□ -2.63
snR39BsnR39B VPS28Q02767 242 aa-1.4□□□□□ -2.63
snR39BsnR39B YUH1P35127 236 aa-1.41□□□□□ -2.64
snR39BsnR39B CBT1P36038 271 aaPredicted RBP-1.42□□□□□ -2.64
snR39BsnR39B IKI1P38874 309 aa-1.42□□□□□ -2.64
snR39BsnR39B YRB1P41920 201 aaKnown RBP-1.42□□□□□ -2.64
snR39BsnR39B RAD17P48581 401 aa-1.42□□□□□ -2.64
snR39BsnR39B NMA1Q06178 401 aaKnown RBP-1.42□□□□□ -2.64
snR39BsnR39B UBR1P19812 1950 aa-1.42□□□□□ -2.64
snR39BsnR39B RFA3P26755 122 aaKnown RBP-1.43□□□□□ -2.64
snR39BsnR39B YER085CP40058 173 aa-1.43□□□□□ -2.64
snR39BsnR39B HOP2P53187 214 aa-1.43□□□□□ -2.64
snR39BsnR39B YGR164WP53291 111 aa-1.43□□□□□ -2.64
snR39BsnR39B EST3Q03096 181 aa-1.43□□□□□ -2.64
snR39BsnR39B YPR114WQ06107 315 aa-1.43□□□□□ -2.64
snR39BsnR39B YOR214CQ12282 236 aa-1.43□□□□□ -2.64
snR39BsnR39B TY1B-HO13535 1793 aa-1.44□□□□□ -2.64
snR39BsnR39B RAD6P06104 172 aa-1.44□□□□□ -2.64
snR39BsnR39B RPA12P32529 125 aaKnown RBP-1.44□□□□□ -2.64
snR39BsnR39B AIM4P38305 123 aaPredicted RBP-1.44□□□□□ -2.64
snR39BsnR39B YEA6P39953 335 aa-1.44□□□□□ -2.64
snR39BsnR39B YEL028WP39989 153 aa-1.44□□□□□ -2.64
snR39BsnR39B COA4Q05809 96 aa-1.44□□□□□ -2.64
snR39BsnR39B GPI11Q06636 219 aa-1.44□□□□□ -2.64
snR39BsnR39B ATG10Q07879 167 aa-1.44□□□□□ -2.64
snR39BsnR39B MHF1Q3E835 90 aa-1.44□□□□□ -2.64
snR39BsnR39B PEX34P25584 144 aa-1.45□□□□□ -2.64
snR39BsnR39B SRL3P36167 246 aa-1.45□□□□□ -2.64
snR39BsnR39B MRPS12P53732 153 aa-1.45□□□□□ -2.64
snR39BsnR39B LIP1Q03579 150 aa-1.45□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms