RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	SNN1	P48232	102 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	FLC3	P53121	802 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	YGR026W	P53217	278 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	YGR050C	P53231	118 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	RPL21A	Q02753	160 aa	Known RBP	2.02	□□□□□ -2.09
ISU1	YPL135W	INP1	Q03694	420 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	YMR244W	Q04018	355 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	API2	Q04413	109 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	SPC3	Q12133	184 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	TIM22	Q12328	207 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	ATG5	Q12380	294 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	DGK1	Q12382	290 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	YDR524C-B	Q3E6R4	66 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	VMA9	Q3E7B6	73 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	PCC1	Q3E833	88 aa		2.02	□□□□□ -2.09
ISU1	YPL135W	RPL25	P04456	142 aa	Known RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	ERG24	P32462	438 aa	Known RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	YBL010C	P32788	280 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	ERV15	P38312	142 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	SLM6	P38343	150 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	PRS3	P38689	320 aa	Known RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	YHL044W	P38727	235 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	ASP1	P38986	381 aa	Predicted RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	BDH1	P39714	382 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	PGD1	P40356	397 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	SYS1	P41544	203 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	RPA43	P46669	326 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	COQ5	P49017	307 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	EMC4	P53073	190 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YGL204C	P53089	101 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	MPA43	P53583	542 aa	Predicted RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	HST4	P53688	370 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	SWT21	P53873	357 aa	Predicted RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	YPL039W	Q03080	316 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	ECM19	Q06011	112 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	MCH1	Q07376	486 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YPD1	Q07688	167 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	ZEO1	Q08245	113 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YOL160W	Q08321	113 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YPL257W	Q08974	193 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YDL211C	Q12121	372 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YPS3	Q12303	508 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	SMT3	Q12306	101 aa	Known RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	DFM1	Q12743	341 aa	Known RBP	2.01	□□□□□ -2.09
ISU1	YPL135W	YBL112C	Q3E7Y4	105 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	YHR214C-E	Q8TGK0	99 aa		2.01	□□□□□ -2.09
ISU1	YPL135W	SOD1	P00445	154 aa	Known RBP	2	□□□□□ -2.09
ISU1	YPL135W	ADK1	P07170	222 aa	Known RBP	2	□□□□□ -2.09
ISU1	YPL135W	YFR010W-A	P0C5N0	62 aa		2	□□□□□ -2.09
ISU1	YPL135W	DOG2	P38773	246 aa		2	□□□□□ -2.09
ISU1	YPL135W	RMD6	P39975	231 aa		2	□□□□□ -2.09
ISU1	YPL135W	IRC22	P40006	225 aa		2	□□□□□ -2.09
ISU1	YPL135W	YJL028W	P47062	111 aa		2	□□□□□ -2.09
ISU1	YPL135W	YJR111C	P47148	283 aa	Known RBP	2	□□□□□ -2.09
ISU1	YPL135W	CCC1	P47818	322 aa		2	□□□□□ -2.09
ISU1	YPL135W	UFD1	P53044	361 aa		2	□□□□□ -2.09
ISU1	YPL135W	YCL001W-A	P87012	153 aa		2	□□□□□ -2.09
ISU1	YPL135W	EST3	Q03096	181 aa		2	□□□□□ -2.09
ISU1	YPL135W	GRH1	Q04410	372 aa	Known RBP	2	□□□□□ -2.09
ISU1	YPL135W	YOL029C	Q08187	201 aa		2	□□□□□ -2.09
ISU1	YPL135W	FAB1	P34756	2278 aa		2	□□□□□ -2.09
ISU1	YPL135W	MBF1	O14467	151 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	KIN28	P06242	306 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	CBP6	P07253	162 aa	Predicted RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	UBI4	P0CG63	381 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	RPL40A	P0CH08	128 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	RPL40B	P0CH09	128 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	RPB9	P27999	122 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	CLB6	P32943	380 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	YOR062C	P36025	268 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	ATG8	P38182	117 aa	RIP-Chip data	1.99	□□□□□ -2.09	not detected
ISU1	YPL135W	SSH1	P38353	490 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	RPF1	P38805	295 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	TRR2	P38816	342 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	TEM1	P38987	245 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	SPC25	P40014	221 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	RRT13	P40042	185 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	EMC5	P40540	141 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	NSE4	P43124	402 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	SOL1	P50278	321 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	RSM27	P53305	110 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	APJ1	P53940	528 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	ARL3	Q02804	198 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	AIM34	Q03673	198 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	PKR1	Q03880	122 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	NMA1	Q06178	401 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	SHH4	Q06236	168 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	NIP7	Q08962	181 aa	Known RBP	1.99	□□□□□ -2.09
ISU1	YPL135W	VPS68	Q12016	184 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	YPR145C-A	Q2V2P0	78 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	YOL085C	Q99345	113 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	HTL1	Q9URQ5	78 aa		1.99	□□□□□ -2.09
ISU1	YPL135W	CYR1	P08678	2026 aa	Known RBP	1.98	□□□□□ -2.09
ISU1	YPL135W	MDM35	O60200	86 aa		1.98	□□□□□ -2.09
ISU1	YPL135W	NOP1	P15646	327 aa	Known RBP	1.98	□□□□□ -2.09
ISU1	YPL135W	FCY2	P17064	533 aa		1.98	□□□□□ -2.09
ISU1	YPL135W	SCO1	P23833	295 aa		1.98	□□□□□ -2.09
ISU1	YPL135W	FMT1	P32785	401 aa		1.98	□□□□□ -2.09
ISU1	YPL135W	TIM12	P32830	109 aa		1.98	□□□□□ -2.09
ISU1	YPL135W	YKL102C	P34249	101 aa		1.98	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms