RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C PAU5P43575 122 aa2.11□□□□□ -2.07
DNL4YOR005C BRR6P53062 197 aa2.11□□□□□ -2.07
DNL4YOR005C TOS8P53147 276 aa2.11□□□□□ -2.07
DNL4YOR005C YIP3P53633 176 aa2.11□□□□□ -2.07
DNL4YOR005C RHO3Q00245 231 aaKnown RBP2.11□□□□□ -2.07
DNL4YOR005C THI74Q04083 370 aa2.11□□□□□ -2.07
DNL4YOR005C SEI1Q06058 285 aa2.11□□□□□ -2.07
DNL4YOR005C NHP6AP11632 93 aaKnown RBP2.11□□□□□ -2.07
DNL4YOR005C SLM6P38343 150 aa2.11□□□□□ -2.07
DNL4YOR005C AGE2P40529 298 aa2.11□□□□□ -2.07
DNL4YOR005C CIN5P40917 295 aa2.11□□□□□ -2.07
DNL4YOR005C SMD3P43321 101 aaKnown RBP2.11□□□□□ -2.07
DNL4YOR005C BXI1P48558 297 aa2.11□□□□□ -2.07
DNL4YOR005C ERG25P53045 309 aa2.11□□□□□ -2.07
DNL4YOR005C CWC27Q02770 301 aa2.11□□□□□ -2.07
DNL4YOR005C YDR248CQ03786 193 aa2.11□□□□□ -2.07
DNL4YOR005C SPG4Q04438 115 aa2.11□□□□□ -2.07
DNL4YOR005C TVP18Q04767 167 aa2.11□□□□□ -2.07
DNL4YOR005C PBA1Q05778 276 aa2.11□□□□□ -2.07
DNL4YOR005C YKR104WP0CE69 306 aa2.1□□□□□ -2.07
DNL4YOR005C YCR025CP25352 136 aa2.1□□□□□ -2.07
DNL4YOR005C YCR101CP25607 182 aa2.1□□□□□ -2.07
DNL4YOR005C TIM12P32830 109 aa2.1□□□□□ -2.07
DNL4YOR005C FRQ1Q06389 190 aa2.1□□□□□ -2.07
DNL4YOR005C YOR376WQ08900 122 aa2.1□□□□□ -2.07
DNL4YOR005C YIL134C-AQ45U18 67 aa2.1□□□□□ -2.07
DNL4YOR005C HAP3P13434 144 aa2.1□□□□□ -2.07
DNL4YOR005C MDH3P32419 343 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
DNL4YOR005C SUI1P32911 108 aaKnown RBP2.1□□□□□ -2.07
DNL4YOR005C MRPL11P36521 249 aaPredicted RBP2.1□□□□□ -2.07
DNL4YOR005C ECM34P38728 170 aa2.1□□□□□ -2.07
DNL4YOR005C SEN15Q04675 128 aa2.1□□□□□ -2.07
DNL4YOR005C MRX8Q05473 314 aa2.1□□□□□ -2.07
DNL4YOR005C PAL1Q05518 499 aaKnown RBP2.1□□□□□ -2.07
DNL4YOR005C IRC25Q07951 179 aa2.1□□□□□ -2.07
DNL4YOR005C VPS68Q12016 184 aa2.1□□□□□ -2.07
DNL4YOR005C AGC1Q12482 902 aa2.1□□□□□ -2.07
DNL4YOR005C YMR316C-AI2HB70 103 aa2.09□□□□□ -2.07
DNL4YOR005C BGL2P15703 313 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C BAT1P38891 393 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C EMC4P53073 190 aa2.09□□□□□ -2.07
DNL4YOR005C PAU4P53427 120 aa2.09□□□□□ -2.07
DNL4YOR005C BUD25P85052 153 aa2.09□□□□□ -2.07
DNL4YOR005C HRI1Q05905 244 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C PPT2Q12036 173 aa2.09□□□□□ -2.07
DNL4YOR005C YPR014CQ6B0W2 109 aa2.09□□□□□ -2.07
DNL4YOR005C YPL229WQ99395 206 aa2.09□□□□□ -2.07
DNL4YOR005C TCA17P32613 152 aa2.09□□□□□ -2.07
DNL4YOR005C UMP1P38293 148 aa2.09□□□□□ -2.07
DNL4YOR005C SSH1P38353 490 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C YER121WP40076 114 aa2.09□□□□□ -2.07
DNL4YOR005C NSA2P40078 261 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C PDR17P53844 350 aa2.09□□□□□ -2.07
DNL4YOR005C ALG9P53868 555 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C APS2Q00381 147 aa2.09□□□□□ -2.07
DNL4YOR005C YLR179CQ06252 201 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C YPR147CQ06522 304 aaKnown RBP2.09□□□□□ -2.07
DNL4YOR005C ATG5Q12380 294 aa2.09□□□□□ -2.07
DNL4YOR005C RAX2Q12465 1220 aa2.09□□□□□ -2.07
DNL4YOR005C PAU1P0CE88 120 aa2.09□□□□□ -2.08
DNL4YOR005C PAU14P0CE89 120 aa2.09□□□□□ -2.08
DNL4YOR005C PAU6P0CE90 120 aa2.09□□□□□ -2.08
DNL4YOR005C PAU18P0CE91 120 aa2.09□□□□□ -2.08
DNL4YOR005C PAU8P0CE92 120 aa2.09□□□□□ -2.08
DNL4YOR005C PAU11P0CE93 120 aa2.09□□□□□ -2.08
DNL4YOR005C PRE1P22141 198 aaKnown RBP2.09□□□□□ -2.08
DNL4YOR005C TRM7P38238 310 aaKnown RBP2.09□□□□□ -2.08
DNL4YOR005C PAU13P38725 120 aa2.09□□□□□ -2.08
DNL4YOR005C OXA1P39952 402 aa2.09□□□□□ -2.08
DNL4YOR005C ERJ5P43613 295 aaPredicted RBP2.09□□□□□ -2.08
DNL4YOR005C SSU72P53538 206 aaPredicted RBP2.09□□□□□ -2.08
DNL4YOR005C VPS28Q02767 242 aa2.09□□□□□ -2.08
DNL4YOR005C PAU10Q03050 120 aa2.09□□□□□ -2.08
DNL4YOR005C YMR082CQ04276 118 aa2.09□□□□□ -2.08
DNL4YOR005C PAU20Q08322 120 aa2.09□□□□□ -2.08
DNL4YOR005C YPL278CQ08990 100 aa2.09□□□□□ -2.08
DNL4YOR005C YOR015WQ12169 119 aa2.09□□□□□ -2.08
DNL4YOR005C PAU9Q3E770 120 aa2.09□□□□□ -2.08
DNL4YOR005C RPL9AP05738 191 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C SPT15P13393 240 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C MDH2P22133 377 aa2.08□□□□□ -2.08
DNL4YOR005C ARO2P28777 376 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C SPS18P32572 300 aa2.08□□□□□ -2.08
DNL4YOR005C YBL059WP34224 193 aa2.08□□□□□ -2.08
DNL4YOR005C YKL102CP34249 101 aa2.08□□□□□ -2.08
DNL4YOR005C RPB11P38902 120 aa2.08□□□□□ -2.08
DNL4YOR005C RPL9BP51401 191 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C MMS2P53152 137 aa2.08□□□□□ -2.08
DNL4YOR005C RNH201P53942 307 aa2.08□□□□□ -2.08
DNL4YOR005C YNL046WP53956 172 aa2.08□□□□□ -2.08
DNL4YOR005C CRZ1P53968 678 aa2.08□□□□□ -2.08
DNL4YOR005C PAU23Q07987 124 aa2.08□□□□□ -2.08
DNL4YOR005C YOL029CQ08187 201 aa2.08□□□□□ -2.08
DNL4YOR005C YOR186WQ08560 144 aa2.08□□□□□ -2.08
DNL4YOR005C PAU17Q12370 124 aa2.08□□□□□ -2.08
DNL4YOR005C RPL21BQ12672 160 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C COX5BP00425 151 aa2.08□□□□□ -2.08
DNL4YOR005C RPS25BP0C0T4 108 aaKnown RBP2.08□□□□□ -2.08
DNL4YOR005C SRP14P38985 146 aa2.08□□□□□ -2.08
DNL4YOR005C LIP2Q06005 328 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 135.4 ms