RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C HSL1P34244 1518 aa-0.43□□□□□ -2.48
VPS20YMR077C RPS25BP0C0T4 108 aaKnown RBP-0.43□□□□□ -2.48
VPS20YMR077C TRX3P25372 127 aa-0.43□□□□□ -2.48
VPS20YMR077C RPS25AQ3E792 108 aaPredicted RBP-0.43□□□□□ -2.48
VPS20YMR077C RIF1P29539 1916 aa-0.43□□□□□ -2.48
VPS20YMR077C QCR7P00128 127 aa-0.44□□□□□ -2.48
VPS20YMR077C SPT14P32363 452 aa-0.44□□□□□ -2.48
VPS20YMR077C PAC10P48363 199 aa-0.44□□□□□ -2.48
VPS20YMR077C GPI17Q04080 534 aa-0.44□□□□□ -2.48
VPS20YMR077C YPR127WQ06494 345 aa-0.44□□□□□ -2.48
VPS20YMR077C NOC4Q06512 552 aaPredicted RBP-0.44□□□□□ -2.48
VPS20YMR077C YOR214CQ12282 236 aa-0.44□□□□□ -2.48
VPS20YMR077C MPD1Q12404 318 aaKnown RBP-0.44□□□□□ -2.48
VPS20YMR077C RAD9P14737 1309 aa-0.44□□□□□ -2.48
VPS20YMR077C TAH1P25638 111 aaPredicted RBP-0.45□□□□□ -2.48
VPS20YMR077C YEL073CP39974 107 aa-0.45□□□□□ -2.48
VPS20YMR077C YNL200CP40165 246 aaKnown RBP-0.45□□□□□ -2.48
VPS20YMR077C NQM1P53228 333 aaPredicted RBP-0.45□□□□□ -2.48
VPS20YMR077C MRPS17Q03246 237 aaPredicted RBP-0.45□□□□□ -2.48
VPS20YMR077C SHH4Q06236 168 aa-0.45□□□□□ -2.48
VPS20YMR077C YOR034C-AQ3E735 80 aa-0.45□□□□□ -2.48
VPS20YMR077C CMC4Q3E7A9 73 aa-0.45□□□□□ -2.48
VPS20YMR077C YDL085C-AQ3E7B7 68 aaKnown RBP-0.45□□□□□ -2.48
VPS20YMR077C TRM3Q07527 1436 aa-0.46□□□□□ -2.48
VPS20YMR077C RAD6P06104 172 aa-0.46□□□□□ -2.48
VPS20YMR077C YHR140WP38842 239 aa-0.46□□□□□ -2.48
VPS20YMR077C YEL014CP39999 101 aa-0.46□□□□□ -2.48
VPS20YMR077C RPS29BP41058 56 aaKnown RBP-0.46□□□□□ -2.48
VPS20YMR077C BRX1Q08235 291 aaKnown RBP-0.46□□□□□ -2.48
VPS20YMR077C SPS2P08459 502 aa-0.47□□□□□ -2.48
VPS20YMR077C YKL102CP34249 101 aa-0.47□□□□□ -2.48
VPS20YMR077C SLM6P38343 150 aa-0.47□□□□□ -2.48
VPS20YMR077C GLC8P41818 229 aa-0.47□□□□□ -2.48
VPS20YMR077C GLR1P41921 483 aaKnown RBP-0.47□□□□□ -2.48
VPS20YMR077C YDL241WQ07738 123 aa-0.47□□□□□ -2.48
VPS20YMR077C HYP2P23301 157 aaKnown RBP-0.48□□□□□ -2.49
VPS20YMR077C HSP150P32478 413 aa-0.48□□□□□ -2.49
VPS20YMR077C ATG8P38182 117 aaRIP-Chip data-0.48□□□□□ -2.49not detected
VPS20YMR077C CSH1P38287 376 aa-0.48□□□□□ -2.49
VPS20YMR077C SOL1P50278 321 aa-0.48□□□□□ -2.49
VPS20YMR077C TIM13P53299 105 aa-0.48□□□□□ -2.49
VPS20YMR077C SYM1Q06563 197 aa-0.48□□□□□ -2.49
VPS20YMR077C INO4P13902 151 aa-0.49□□□□□ -2.49
VPS20YMR077C AHC2P25649 128 aa-0.49□□□□□ -2.49
VPS20YMR077C CAF4P36130 643 aa-0.49□□□□□ -2.49
VPS20YMR077C ECM31P38122 312 aa-0.49□□□□□ -2.49
VPS20YMR077C HTD2P38790 280 aaKnown RBP-0.49□□□□□ -2.49
VPS20YMR077C YEL028WP39989 153 aa-0.49□□□□□ -2.49
VPS20YMR077C FMP32P43557 207 aa-0.49□□□□□ -2.49
VPS20YMR077C HOP2P53187 214 aa-0.49□□□□□ -2.49
VPS20YMR077C GRX8Q05926 109 aa-0.49□□□□□ -2.49
VPS20YMR077C UIP4Q08926 304 aa-0.49□□□□□ -2.49
VPS20YMR077C MDN1Q12019 4910 aaKnown RBP-0.49□□□□□ -2.49
VPS20YMR077C TTI2P47168 421 aa-0.5□□□□□ -2.49
VPS20YMR077C LIP1Q03579 150 aa-0.5□□□□□ -2.49
VPS20YMR077C SNF2P22082 1703 aa-0.51□□□□□ -2.49
VPS20YMR077C BLM10P43583 2143 aa-0.51□□□□□ -2.49
VPS20YMR077C ADE6P38972 1358 aaKnown RBP-0.52□□□□□ -2.49
VPS20YMR077C RPB4P20433 221 aaPredicted RBP-0.52□□□□□ -2.49
VPS20YMR077C YJL009WP47078 108 aa-0.52□□□□□ -2.49
VPS20YMR077C RPL33AP05744 107 aaKnown RBP-0.53□□□□□ -2.49
VPS20YMR077C NVJ1P38881 321 aa-0.53□□□□□ -2.49
VPS20YMR077C IPT1P38954 527 aa-0.53□□□□□ -2.49
VPS20YMR077C RIB3Q99258 208 aa-0.53□□□□□ -2.49
VPS20YMR077C YKR041WP36134 250 aa-0.54□□□□□ -2.5
VPS20YMR077C MVB12P42939 101 aa-0.54□□□□□ -2.5
VPS20YMR077C FMN1Q03778 218 aa-0.54□□□□□ -2.5
VPS20YMR077C RNH1Q04740 348 aa-0.54□□□□□ -2.5
VPS20YMR077C YMR321CQ04898 105 aa-0.54□□□□□ -2.5
VPS20YMR077C SPA2P23201 1466 aaKnown RBP-0.54□□□□□ -2.5
VPS20YMR077C NUF2P33895 451 aa-0.55□□□□□ -2.5
VPS20YMR077C HPT1Q04178 221 aaKnown RBP-0.55□□□□□ -2.5
VPS20YMR077C YPR114WQ06107 315 aa-0.55□□□□□ -2.5
VPS20YMR077C ATG10Q07879 167 aa-0.55□□□□□ -2.5
VPS20YMR077C HUG1Q6Q5K6 68 aa-0.56□□□□□ -2.5
VPS20YMR077C YPT31P38555 223 aaKnown RBP-0.57□□□□□ -2.5
VPS20YMR077C SNO1Q03144 224 aa-0.57□□□□□ -2.5
VPS20YMR077C NMA1Q06178 401 aaKnown RBP-0.57□□□□□ -2.5
VPS20YMR077C SHG1P38337 142 aa-0.58□□□□□ -2.5
VPS20YMR077C XPT1P47165 209 aa-0.58□□□□□ -2.5
VPS20YMR077C YNR064CP53750 290 aa-0.58□□□□□ -2.5
VPS20YMR077C IRC21Q04772 201 aa-0.58□□□□□ -2.5
VPS20YMR077C COA6Q3E846 104 aa-0.58□□□□□ -2.5
VPS20YMR077C YKT6P36015 200 aaKnown RBP-0.59□□□□□ -2.5
VPS20YMR077C DIE2P50076 525 aa-0.59□□□□□ -2.5
VPS20YMR077C FIT3Q08907 204 aa-0.59□□□□□ -2.5
VPS20YMR077C YGL041W-AP0C5N3 154 aa-0.6□□□□□ -2.51
VPS20YMR077C PHO13P19881 312 aa-0.6□□□□□ -2.51
VPS20YMR077C SRP102P36057 244 aaPredicted RBP-0.6□□□□□ -2.51
VPS20YMR077C PEX11Q12462 236 aa-0.61□□□□□ -2.51
VPS20YMR077C URA2P07259 2214 aaKnown RBP-0.62□□□□□ -2.51
VPS20YMR077C YGL014C-AP0C5N1 53 aa-0.62□□□□□ -2.51
VPS20YMR077C APA2P22108 325 aa-0.62□□□□□ -2.51
VPS20YMR077C PEX34P25584 144 aa-0.62□□□□□ -2.51
VPS20YMR077C JAC1P53193 184 aa-0.62□□□□□ -2.51
VPS20YMR077C RCF2P53721 224 aa-0.62□□□□□ -2.51
VPS20YMR077C THI74Q04083 370 aa-0.62□□□□□ -2.51
VPS20YMR077C GPI11Q06636 219 aa-0.62□□□□□ -2.51
VPS20YMR077C LAA1P39526 2014 aa-0.63□□□□□ -2.51
VPS20YMR077C SRL3P36167 246 aa-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 150.7 ms