RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W BOL2P53082 120 aa-0.24□□□□□ -2.45
PRP39YML046W HOP2P53187 214 aa-0.24□□□□□ -2.45
PRP39YML046W SWP1Q02795 286 aa-0.24□□□□□ -2.45
PRP39YML046W UPS3Q04006 179 aa-0.24□□□□□ -2.45
PRP39YML046W VBA1Q04301 562 aa-0.24□□□□□ -2.45
PRP39YML046W YPR098CQ06089 161 aa-0.24□□□□□ -2.45
PRP39YML046W YGR240C-AQ3E786 66 aa-0.24□□□□□ -2.45
PRP39YML046W RPL9AP05738 191 aaKnown RBP-0.25□□□□□ -2.45
PRP39YML046W RPB4P20433 221 aaPredicted RBP-0.25□□□□□ -2.45
PRP39YML046W PEX3P28795 441 aa-0.25□□□□□ -2.45
PRP39YML046W CIN5P40917 295 aa-0.25□□□□□ -2.45
PRP39YML046W CAT5P41735 233 aa-0.25□□□□□ -2.45
PRP39YML046W GTO1P48239 356 aa-0.25□□□□□ -2.45
PRP39YML046W RPL9BP51401 191 aaKnown RBP-0.25□□□□□ -2.45
PRP39YML046W YNL260CP53846 198 aa-0.25□□□□□ -2.45
PRP39YML046W SNA2P56508 79 aa-0.25□□□□□ -2.45
PRP39YML046W RRN5Q02983 363 aa-0.25□□□□□ -2.45
PRP39YML046W SNO1Q03144 224 aa-0.25□□□□□ -2.45
PRP39YML046W YDR248CQ03786 193 aa-0.25□□□□□ -2.45
PRP39YML046W YHR050W-AQ05451 56 aa-0.25□□□□□ -2.45
PRP39YML046W MED4Q12343 284 aa-0.25□□□□□ -2.45
PRP39YML046W YNL146C-AQ3E7Z1 64 aa-0.25□□□□□ -2.45
PRP39YML046W YHR214C-EQ8TGK0 99 aa-0.25□□□□□ -2.45
PRP39YML046W RPL33AP05744 107 aaKnown RBP-0.26□□□□□ -2.45
PRP39YML046W SIR2P06700 562 aa-0.26□□□□□ -2.45
PRP39YML046W YHR213WP0CI67 198 aa-0.26□□□□□ -2.45
PRP39YML046W MEK1P24719 497 aaPredicted RBP-0.26□□□□□ -2.45
PRP39YML046W ARC19P33204 171 aaKnown RBP-0.26□□□□□ -2.45
PRP39YML046W SRY1P36007 326 aa-0.26□□□□□ -2.45
PRP39YML046W LAS1P36146 502 aaPredicted RBP-0.26□□□□□ -2.45
PRP39YML046W BIG1P38813 335 aa-0.26□□□□□ -2.45
PRP39YML046W RPL33BP41056 107 aaKnown RBP-0.26□□□□□ -2.45
PRP39YML046W RIB4P50861 169 aaPredicted RBP-0.26□□□□□ -2.45
PRP39YML046W CPD1P53314 239 aa-0.26□□□□□ -2.45
PRP39YML046W MPP6P53725 186 aaPredicted RBP-0.26□□□□□ -2.45
PRP39YML046W TIM8P57744 87 aa-0.26□□□□□ -2.45
PRP39YML046W GRX3Q03835 250 aa-0.26□□□□□ -2.45
PRP39YML046W AVO2Q04749 426 aa-0.26□□□□□ -2.45
PRP39YML046W ARV1Q06541 321 aa-0.26□□□□□ -2.45
PRP39YML046W POM33Q12164 279 aa-0.26□□□□□ -2.45
PRP39YML046W TFC1P32367 649 aa-0.27□□□□□ -2.45
PRP39YML046W YER189WP40104 122 aa-0.27□□□□□ -2.45
PRP39YML046W YRB2P40517 327 aa-0.27□□□□□ -2.45
PRP39YML046W COX16P47081 118 aa-0.27□□□□□ -2.45
PRP39YML046W TTI2P47168 421 aa-0.27□□□□□ -2.45
PRP39YML046W HPT1Q04178 221 aaKnown RBP-0.27□□□□□ -2.45
PRP39YML046W YLR042CQ07990 161 aa-0.27□□□□□ -2.45
PRP39YML046W YOR289WQ12012 251 aaPredicted RBP-0.27□□□□□ -2.45
PRP39YML046W SIA1Q12212 622 aa-0.27□□□□□ -2.45
PRP39YML046W YML054C-AQ3E809 52 aa-0.27□□□□□ -2.45
PRP39YML046W FMP49A0A023PZB3 126 aa-0.27□□□□□ -2.45
PRP39YML046W ECM12O13529 151 aa-0.27□□□□□ -2.45
PRP39YML046W YLR462WO13556 202 aa-0.27□□□□□ -2.45
PRP39YML046W RPL27BP0C2H7 136 aaKnown RBP-0.27□□□□□ -2.45
PRP39YML046W POF1P25576 258 aa-0.27□□□□□ -2.45
PRP39YML046W MRPL38P35996 138 aaPredicted RBP-0.27□□□□□ -2.45
PRP39YML046W YEL075CP39972 122 aa-0.27□□□□□ -2.45
PRP39YML046W YEA4P40004 342 aa-0.27□□□□□ -2.45
PRP39YML046W TIR3P40552 269 aa-0.27□□□□□ -2.45
PRP39YML046W GCN20P43535 752 aaKnown RBP-0.27□□□□□ -2.45
PRP39YML046W IRC18P47056 224 aa-0.27□□□□□ -2.45
PRP39YML046W MCM22P47167 239 aa-0.27□□□□□ -2.45
PRP39YML046W GPI8P49018 411 aa-0.27□□□□□ -2.45
PRP39YML046W YGL159WP53110 370 aa-0.27□□□□□ -2.45
PRP39YML046W SPP2Q02521 185 aa-0.27□□□□□ -2.45
PRP39YML046W ATG38Q05789 226 aaKnown RBP-0.27□□□□□ -2.45
PRP39YML046W SFH1Q06168 426 aa-0.27□□□□□ -2.45
PRP39YML046W MRP1P10662 321 aaKnown RBP-0.28□□□□□ -2.45
PRP39YML046W PET54P10834 293 aa-0.28□□□□□ -2.45
PRP39YML046W MRS4P23500 304 aa-0.28□□□□□ -2.45
PRP39YML046W YHL005CP38752 130 aa-0.28□□□□□ -2.45
PRP39YML046W YFL019CP43576 117 aa-0.28□□□□□ -2.45
PRP39YML046W YAE1P47118 141 aaPredicted RBP-0.28□□□□□ -2.45
PRP39YML046W POP3P53833 195 aaPredicted RBP-0.28□□□□□ -2.45
PRP39YML046W YDR124WQ04608 324 aa-0.28□□□□□ -2.45
PRP39YML046W ANT1Q06497 328 aa-0.28□□□□□ -2.45
PRP39YML046W YGL041C-BQ3E750 60 aa-0.28□□□□□ -2.45
PRP39YML046W YOR011W-AQ3E807 68 aa-0.28□□□□□ -2.45
PRP39YML046W SCS22Q6Q595 175 aa-0.28□□□□□ -2.45
PRP39YML046W YHR139C-AO13536 103 aa-0.29□□□□□ -2.46
PRP39YML046W ADK1P07170 222 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W SFK1P35735 353 aa-0.29□□□□□ -2.46
PRP39YML046W RPL14AP36105 138 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W RPL14BP38754 138 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W THO1P40040 218 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W RGI1P40043 161 aaPredicted RBP-0.29□□□□□ -2.46
PRP39YML046W YGL101WP53144 215 aa-0.29□□□□□ -2.46
PRP39YML046W SAY1P53324 424 aa-0.29□□□□□ -2.46
PRP39YML046W PET117Q02771 107 aa-0.29□□□□□ -2.46
PRP39YML046W FAR8Q05040 523 aa-0.29□□□□□ -2.46
PRP39YML046W YOR214CQ12282 236 aa-0.29□□□□□ -2.46
PRP39YML046W YBL008W-AQ3E821 79 aa-0.29□□□□□ -2.46
PRP39YML046W ERG24P32462 438 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W BMH2P34730 273 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W ECM4P36156 370 aa-0.29□□□□□ -2.46
PRP39YML046W AIM18P38884 321 aa-0.29□□□□□ -2.46
PRP39YML046W YER034WP40022 185 aaKnown RBP-0.29□□□□□ -2.46
PRP39YML046W YNL217WP40152 326 aa-0.29□□□□□ -2.46
PRP39YML046W MOG1P47123 218 aa-0.29□□□□□ -2.46
PRP39YML046W SPG1P50088 95 aa-0.29□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms