RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W YKR041WP36134 250 aa0.17□□□□□ -2.38
BER1YLR412W YGR269WP40326 108 aa0.17□□□□□ -2.38
BER1YLR412W PAC10P48363 199 aa0.17□□□□□ -2.38
BER1YLR412W SOL1P50278 321 aa0.17□□□□□ -2.38
BER1YLR412W YML079WQ03629 201 aa0.17□□□□□ -2.38
BER1YLR412W YEL073CP39974 107 aa0.16□□□□□ -2.38
BER1YLR412W TTI2P47168 421 aa0.16□□□□□ -2.38
BER1YLR412W TIM13P53299 105 aa0.16□□□□□ -2.38
BER1YLR412W SNO1Q03144 224 aa0.16□□□□□ -2.38
BER1YLR412W HRD1Q08109 551 aa0.16□□□□□ -2.38
BER1YLR412W APA2P22108 325 aa0.15□□□□□ -2.39
BER1YLR412W SHG1P38337 142 aa0.15□□□□□ -2.39
BER1YLR412W RPS25BP0C0T4 108 aaKnown RBP0.14□□□□□ -2.39
BER1YLR412W NVJ1P38881 321 aa0.14□□□□□ -2.39
BER1YLR412W RPS25AQ3E792 108 aaPredicted RBP0.14□□□□□ -2.39
BER1YLR412W ROM2P51862 1356 aaKnown RBP0.14□□□□□ -2.39
BER1YLR412W TAF2P23255 1407 aa0.13□□□□□ -2.39
BER1YLR412W YBR027CP38220 110 aa0.13□□□□□ -2.39
BER1YLR412W YEL028WP39989 153 aa0.13□□□□□ -2.39
BER1YLR412W APS3P47064 194 aa0.13□□□□□ -2.39
BER1YLR412W GEP7P53171 287 aa0.13□□□□□ -2.39
BER1YLR412W YNL122CP53921 115 aaPredicted RBP0.13□□□□□ -2.39
BER1YLR412W VAM10Q08474 114 aa0.13□□□□□ -2.39
BER1YLR412W SPS2P08459 502 aa0.12□□□□□ -2.39
BER1YLR412W HOP2P53187 214 aa0.12□□□□□ -2.39
BER1YLR412W NQM1P53228 333 aaPredicted RBP0.12□□□□□ -2.39
BER1YLR412W CWC21Q03375 135 aaKnown RBP0.12□□□□□ -2.39
BER1YLR412W HPT1Q04178 221 aaKnown RBP0.12□□□□□ -2.39
BER1YLR412W TRM3Q07527 1436 aa0.12□□□□□ -2.39
BER1YLR412W CSH1P38287 376 aa0.11□□□□□ -2.39
BER1YLR412W MGR2Q02889 113 aa0.11□□□□□ -2.39
BER1YLR412W SYM1Q06563 197 aa0.11□□□□□ -2.39
BER1YLR412W SPT14P32363 452 aa0.1□□□□□ -2.39
BER1YLR412W GLR1P41921 483 aaKnown RBP0.1□□□□□ -2.39
BER1YLR412W CCC1P47818 322 aa0.1□□□□□ -2.39
BER1YLR412W YDL241WQ07738 123 aa0.1□□□□□ -2.39
BER1YLR412W CMC4Q3E7A9 73 aa0.1□□□□□ -2.39
BER1YLR412W RIF1P29539 1916 aa0.09□□□□□ -2.39
BER1YLR412W LIP1Q03579 150 aa0.09□□□□□ -2.4
BER1YLR412W RPS22AP0C0W1 130 aaKnown RBP0.08□□□□□ -2.4
BER1YLR412W INO4P13902 151 aa0.08□□□□□ -2.4
BER1YLR412W YEL014CP39999 101 aa0.08□□□□□ -2.4
BER1YLR412W GLC8P41818 229 aa0.08□□□□□ -2.4
BER1YLR412W XPT1P47165 209 aa0.08□□□□□ -2.4
BER1YLR412W YET3Q07451 203 aa0.08□□□□□ -2.4
BER1YLR412W YOR072WQ08486 104 aa0.08□□□□□ -2.4
BER1YLR412W UIP4Q08926 304 aa0.08□□□□□ -2.4
BER1YLR412W RPS22BQ3E7Y3 130 aaKnown RBP0.08□□□□□ -2.4
BER1YLR412W YLR307C-AQ3E825 87 aa0.08□□□□□ -2.4
BER1YLR412W HSP150P32478 413 aa0.07□□□□□ -2.4
BER1YLR412W NUF2P33895 451 aa0.07□□□□□ -2.4
BER1YLR412W YMR141CP40211 102 aa0.07□□□□□ -2.4
BER1YLR412W PEX11Q12462 236 aa0.07□□□□□ -2.4
BER1YLR412W HAP2P06774 265 aa0.06□□□□□ -2.4
BER1YLR412W RPL43AP0CX25 92 aaKnown RBP0.06□□□□□ -2.4
BER1YLR412W RPL43BP0CX26 92 aa0.06□□□□□ -2.4
BER1YLR412W PTC1P35182 281 aa0.06□□□□□ -2.4
BER1YLR412W JAC1P53193 184 aa0.06□□□□□ -2.4
BER1YLR412W ATG10Q07879 167 aa0.05□□□□□ -2.4
BER1YLR412W UBC6P33296 250 aaPredicted RBP0.04□□□□□ -2.4
BER1YLR412W GRE1Q08969 168 aa0.04□□□□□ -2.4
BER1YLR412W ATG8P38182 117 aaRIP-Chip data0.03□□□□□ -2.4not detected
BER1YLR412W YPT31P38555 223 aaKnown RBP0.03□□□□□ -2.4
BER1YLR412W THI74Q04083 370 aa0.03□□□□□ -2.4
BER1YLR412W YPR114WQ06107 315 aa0.03□□□□□ -2.4
BER1YLR412W YLR157W-EP0CF00 54 aa0.02□□□□□ -2.41
BER1YLR412W TRR1P29509 319 aaKnown RBP0.02□□□□□ -2.41
BER1YLR412W ADE6P38972 1358 aaKnown RBP0.02□□□□□ -2.41
BER1YLR412W HYP2P23301 157 aaKnown RBP0.01□□□□□ -2.41
BER1YLR412W ATP7P30902 174 aa0.01□□□□□ -2.41
BER1YLR412W ECM31P38122 312 aa0.01□□□□□ -2.41
BER1YLR412W PLP1Q04004 230 aa0.01□□□□□ -2.41
BER1YLR412W IPT1P38954 527 aa0□□□□□ -2.41
BER1YLR412W YNR064CP53750 290 aa0□□□□□ -2.41
BER1YLR412W SRP102P36057 244 aaPredicted RBP-0.01□□□□□ -2.41
BER1YLR412W YDR102CQ03864 110 aa-0.02□□□□□ -2.41
BER1YLR412W SEN15Q04675 128 aa-0.02□□□□□ -2.41
BER1YLR412W NMA1Q06178 401 aaKnown RBP-0.02□□□□□ -2.41
BER1YLR412W RIB3Q99258 208 aa-0.02□□□□□ -2.41
BER1YLR412W YHR140WP38842 239 aa-0.03□□□□□ -2.41
BER1YLR412W YIP3P53633 176 aa-0.03□□□□□ -2.41
BER1YLR412W HSK3P69852 69 aa-0.03□□□□□ -2.41
BER1YLR412W YLR050CQ12155 161 aaKnown RBP-0.03□□□□□ -2.41
BER1YLR412W HSL1P34244 1518 aa-0.03□□□□□ -2.41
BER1YLR412W RAD51P25454 400 aa-0.04□□□□□ -2.42
BER1YLR412W SEC72P39742 193 aaKnown RBP-0.04□□□□□ -2.42
BER1YLR412W FMN1Q03778 218 aa-0.04□□□□□ -2.42
BER1YLR412W RPL33AP05744 107 aaKnown RBP-0.05□□□□□ -2.42
BER1YLR412W CMD1P06787 147 aaKnown RBP-0.05□□□□□ -2.42
BER1YLR412W HTD2P38790 280 aaKnown RBP-0.05□□□□□ -2.42
BER1YLR412W YLR046CQ12253 270 aa-0.05□□□□□ -2.42
BER1YLR412W SPA2P23201 1466 aaKnown RBP-0.05□□□□□ -2.42
BER1YLR412W CDC39P25655 2108 aaKnown RBP-0.05□□□□□ -2.42
BER1YLR412W MRS4P23500 304 aa-0.06□□□□□ -2.42
BER1YLR412W SRP14P38985 146 aa-0.06□□□□□ -2.42
BER1YLR412W RCF2P53721 224 aa-0.06□□□□□ -2.42
BER1YLR412W ATP5P09457 212 aa-0.07□□□□□ -2.42
BER1YLR412W YGL041W-AP0C5N3 154 aa-0.07□□□□□ -2.42
BER1YLR412W YJL009WP47078 108 aa-0.07□□□□□ -2.42
BER1YLR412W GRX3Q03835 250 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms