RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C HEM4P06174 275 aa9.26□□□□□ -0.93
SPT8YLR055C DFR1P07807 211 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
SPT8YLR055C SRP21P32342 167 aa9.26□□□□□ -0.93
SPT8YLR055C YKL187CP34231 750 aa9.26□□□□□ -0.93
SPT8YLR055C PAU16P35994 123 aa9.26□□□□□ -0.93
SPT8YLR055C PAM17P36147 197 aa9.26□□□□□ -0.93
SPT8YLR055C POP7P38291 140 aa9.26□□□□□ -0.93
SPT8YLR055C DOG1P38774 246 aa9.26□□□□□ -0.93
SPT8YLR055C YHR138CP38841 114 aaPredicted RBP9.26□□□□□ -0.93
SPT8YLR055C TVP18Q04767 167 aa9.26□□□□□ -0.93
SPT8YLR055C YPR098CQ06089 161 aa9.26□□□□□ -0.93
SPT8YLR055C YCR024C-BQ3E7Z8 88 aa9.26□□□□□ -0.93
SPT8YLR055C SOD1P00445 154 aaKnown RBP9.26□□□□□ -0.93
SPT8YLR055C RPL43AP0CX25 92 aaKnown RBP9.26□□□□□ -0.93
SPT8YLR055C RPL43BP0CX26 92 aa9.26□□□□□ -0.93
SPT8YLR055C ROX3P25046 220 aa9.26□□□□□ -0.93
SPT8YLR055C RPA43P46669 326 aa9.26□□□□□ -0.93
SPT8YLR055C COX16P47081 118 aa9.26□□□□□ -0.93
SPT8YLR055C YNL092WP53934 400 aa9.26□□□□□ -0.93
SPT8YLR055C DYN2Q02647 92 aa9.26□□□□□ -0.93
SPT8YLR055C YAP6Q03935 383 aa9.26□□□□□ -0.93
SPT8YLR055C SHH3Q04487 196 aa9.26□□□□□ -0.93
SPT8YLR055C YPS3Q12303 508 aa9.26□□□□□ -0.93
SPT8YLR055C YBR184WP38299 523 aa9.25□□□□□ -0.93
SPT8YLR055C PSD1P39006 500 aa9.25□□□□□ -0.93
SPT8YLR055C MIC27P50945 234 aa9.25□□□□□ -0.93
SPT8YLR055C HSK3P69852 69 aa9.25□□□□□ -0.93
SPT8YLR055C YDR391CQ04170 232 aa9.25□□□□□ -0.93
SPT8YLR055C REC104P33323 182 aa9.24□□□□□ -0.93
SPT8YLR055C CPD1P53314 239 aa9.24□□□□□ -0.93
SPT8YLR055C MRL1Q06815 381 aa9.24□□□□□ -0.93
SPT8YLR055C RPS2P25443 254 aaKnown RBP9.24□□□□□ -0.93
SPT8YLR055C SOH1P38633 127 aa9.24□□□□□ -0.93
SPT8YLR055C EGT2P42835 1041 aa9.24□□□□□ -0.93
SPT8YLR055C TRI1Q05024 226 aa9.24□□□□□ -0.93
SPT8YLR055C PAU23Q07987 124 aa9.24□□□□□ -0.93
SPT8YLR055C PAU17Q12370 124 aa9.24□□□□□ -0.93
SPT8YLR055C RPS22BQ3E7Y3 130 aaKnown RBP9.24□□□□□ -0.93
SPT8YLR055C CUP2P15315 225 aa9.23□□□□□ -0.93
SPT8YLR055C PRE5P40302 234 aaKnown RBP9.23□□□□□ -0.93
SPT8YLR055C YJL028WP47062 111 aa9.23□□□□□ -0.93
SPT8YLR055C YDL157CQ12082 118 aa9.23□□□□□ -0.93
SPT8YLR055C MRS3P10566 314 aa9.22□□□□□ -0.93
SPT8YLR055C YGR151CP53287 111 aa9.22□□□□□ -0.93
SPT8YLR055C RUB1Q03919 77 aa9.22□□□□□ -0.93
SPT8YLR055C VPS63O13549 108 aa9.21□□□□□ -0.93
SPT8YLR055C YBR090CP38253 122 aa9.21□□□□□ -0.93
SPT8YLR055C YMR166CQ03829 368 aa9.21□□□□□ -0.93
SPT8YLR055C CNL1Q06333 122 aa9.21□□□□□ -0.93
SPT8YLR055C YGL258W-AQ3E740 77 aa9.21□□□□□ -0.93
SPT8YLR055C YMR316C-AI2HB70 103 aa9.21□□□□□ -0.94
SPT8YLR055C UTR5P32630 166 aa9.21□□□□□ -0.94
SPT8YLR055C MRPS5P33759 307 aa9.21□□□□□ -0.94
SPT8YLR055C YDR366CP87287 132 aa9.21□□□□□ -0.94
SPT8YLR055C RPL35AP0CX84 120 aaKnown RBP9.2□□□□□ -0.94
SPT8YLR055C RPL35BP0CX85 120 aaKnown RBP9.2□□□□□ -0.94
SPT8YLR055C YMR31P19955 123 aa9.2□□□□□ -0.94
SPT8YLR055C QRI5P32344 111 aa9.2□□□□□ -0.94
SPT8YLR055C TEM1P38987 245 aa9.2□□□□□ -0.94
SPT8YLR055C YER084WP40057 128 aa9.2□□□□□ -0.94
SPT8YLR055C CSM4Q08955 156 aa9.2□□□□□ -0.94
SPT8YLR055C GSP1P32835 219 aaKnown RBP9.19□□□□□ -0.94
SPT8YLR055C GSP2P32836 220 aaKnown RBP9.19□□□□□ -0.94
SPT8YLR055C UBC13P52490 153 aa9.19□□□□□ -0.94
SPT8YLR055C HMRA1P0CY11 126 aa9.19□□□□□ -0.94
SPT8YLR055C RPI1P23250 407 aaKnown RBP9.19□□□□□ -0.94
SPT8YLR055C CIN5P40917 295 aa9.19□□□□□ -0.94
SPT8YLR055C YHP1Q04116 353 aa9.19□□□□□ -0.94
SPT8YLR055C LPP1Q04396 274 aa9.19□□□□□ -0.94
SPT8YLR055C RRS1Q08746 203 aaKnown RBP9.19□□□□□ -0.94
SPT8YLR055C YLR302CO13544 120 aa9.18□□□□□ -0.94
SPT8YLR055C YER190C-BP0CX94 160 aa9.18□□□□□ -0.94
SPT8YLR055C YEL077W-AP0CX95 160 aa9.18□□□□□ -0.94
SPT8YLR055C YGR296C-BP0CX96 160 aa9.18□□□□□ -0.94
SPT8YLR055C YPL283W-BP0CX97 160 aa9.18□□□□□ -0.94
SPT8YLR055C YPR204C-AP0CX98 160 aa9.18□□□□□ -0.94
SPT8YLR055C YER188WP40103 239 aa9.18□□□□□ -0.94
SPT8YLR055C YFL051CP43552 160 aa9.18□□□□□ -0.94
SPT8YLR055C POS5Q06892 414 aa9.18□□□□□ -0.94
SPT8YLR055C SEC4P07560 215 aaKnown RBP9.17□□□□□ -0.94
SPT8YLR055C RAD23P32628 398 aaKnown RBP9.17□□□□□ -0.94
SPT8YLR055C AIM29P36154 155 aa9.17□□□□□ -0.94
SPT8YLR055C SIP18P50263 79 aa9.17□□□□□ -0.94
SPT8YLR055C LIP2Q06005 328 aa9.17□□□□□ -0.94
SPT8YLR055C TOM40P23644 387 aaKnown RBP9.17□□□□□ -0.94
SPT8YLR055C NNK1P36003 928 aa9.17□□□□□ -0.94
SPT8YLR055C PMU1P36069 295 aa9.17□□□□□ -0.94
SPT8YLR055C YHL037CP38733 133 aa9.17□□□□□ -0.94
SPT8YLR055C TDA4P47153 279 aa9.17□□□□□ -0.94
SPT8YLR055C API2Q04413 109 aa9.17□□□□□ -0.94
SPT8YLR055C SAS2P40963 338 aa9.16□□□□□ -0.94
SPT8YLR055C THG1P53215 237 aaKnown RBP9.16□□□□□ -0.94
SPT8YLR055C YPL162CQ12042 273 aa9.16□□□□□ -0.94
SPT8YLR055C RNH203Q12338 110 aa9.16□□□□□ -0.94
SPT8YLR055C ZRT1P32804 376 aa9.15□□□□□ -0.94
SPT8YLR055C RFM1Q12192 310 aa9.15□□□□□ -0.94
SPT8YLR055C HTB1P02293 131 aaKnown RBP9.15□□□□□ -0.95
SPT8YLR055C HTB2P02294 131 aa9.15□□□□□ -0.95
SPT8YLR055C YCR007CP25354 239 aa9.15□□□□□ -0.95
SPT8YLR055C RKI1Q12189 258 aa9.15□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 162.9 ms