RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C COX12Q01519 83 aa2.23□□□□□ -2.05
SDO1YLR022C CDC8P00572 216 aa2.22□□□□□ -2.05
SDO1YLR022C MRPL28P36527 147 aa2.22□□□□□ -2.05
SDO1YLR022C POP8P38208 133 aa2.22□□□□□ -2.05
SDO1YLR022C YGL101WP53144 215 aa2.22□□□□□ -2.05
SDO1YLR022C FMP48P53233 369 aa2.22□□□□□ -2.05
SDO1YLR022C YDR115WQ04598 105 aa2.22□□□□□ -2.05
SDO1YLR022C YPR195CQ06594 109 aa2.22□□□□□ -2.05
SDO1YLR022C SPC3Q12133 184 aa2.22□□□□□ -2.05
SDO1YLR022C TRM10Q12400 293 aa2.22□□□□□ -2.05
SDO1YLR022C LSO2Q3E772 92 aaKnown RBP2.22□□□□□ -2.05
SDO1YLR022C YDL085C-AQ3E7B7 68 aaKnown RBP2.22□□□□□ -2.05
SDO1YLR022C PUT1P09368 476 aa2.21□□□□□ -2.06
SDO1YLR022C SNF4P12904 322 aa2.21□□□□□ -2.06
SDO1YLR022C ATG22P25568 528 aa2.21□□□□□ -2.06
SDO1YLR022C ERG2P32352 222 aa2.21□□□□□ -2.06
SDO1YLR022C EDC2P40023 145 aaPredicted RBP2.21□□□□□ -2.06
SDO1YLR022C AVT6P40074 448 aa2.21□□□□□ -2.06
SDO1YLR022C YER137CP40083 148 aaKnown RBP2.21□□□□□ -2.06
SDO1YLR022C FAR7P43592 221 aa2.21□□□□□ -2.06
SDO1YLR022C IGD1P43598 195 aa2.21□□□□□ -2.06
SDO1YLR022C YGL262WP53054 175 aa2.21□□□□□ -2.06
SDO1YLR022C FMP41P53889 259 aaKnown RBP2.21□□□□□ -2.06
SDO1YLR022C NRK1P53915 240 aa2.21□□□□□ -2.06
SDO1YLR022C MRPS16Q02608 121 aa2.21□□□□□ -2.06
SDO1YLR022C MRX11Q03079 207 aa2.21□□□□□ -2.06
SDO1YLR022C SNO1Q03144 224 aa2.21□□□□□ -2.06
SDO1YLR022C MRX8Q05473 314 aa2.21□□□□□ -2.06
SDO1YLR022C LOA1Q06508 300 aa2.21□□□□□ -2.06
SDO1YLR022C MCH1Q07376 486 aa2.21□□□□□ -2.06
SDO1YLR022C LCL2Q08045 131 aa2.21□□□□□ -2.06
SDO1YLR022C YOR186WQ08560 144 aa2.21□□□□□ -2.06
SDO1YLR022C YBL008W-AQ3E821 79 aa2.21□□□□□ -2.06
SDO1YLR022C CDC28P00546 298 aaKnown RBP2.2□□□□□ -2.06
SDO1YLR022C RPL25P04456 142 aaKnown RBP2.2□□□□□ -2.06
SDO1YLR022C DPM1P14020 267 aaKnown RBP2.2□□□□□ -2.06
SDO1YLR022C CUP2P15315 225 aa2.2□□□□□ -2.06
SDO1YLR022C PHO80P20052 293 aa2.2□□□□□ -2.06
SDO1YLR022C SPS18P32572 300 aa2.2□□□□□ -2.06
SDO1YLR022C UPS1Q05776 175 aa2.2□□□□□ -2.06
SDO1YLR022C ATG39Q06159 398 aa2.2□□□□□ -2.06
SDO1YLR022C NOC4Q06512 552 aaPredicted RBP2.2□□□□□ -2.06
SDO1YLR022C MPD1Q12404 318 aaKnown RBP2.2□□□□□ -2.06
SDO1YLR022C TAR1Q8TGM6 124 aa2.2□□□□□ -2.06
SDO1YLR022C ANB1P19211 157 aa2.19□□□□□ -2.06
SDO1YLR022C MRS4P23500 304 aa2.19□□□□□ -2.06
SDO1YLR022C OCH1P31755 480 aa2.19□□□□□ -2.06
SDO1YLR022C ACP1P32463 125 aa2.19□□□□□ -2.06
SDO1YLR022C APS1P35181 156 aa2.19□□□□□ -2.06
SDO1YLR022C POP7P38291 140 aa2.19□□□□□ -2.06
SDO1YLR022C RPS20P38701 121 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C YNL200CP40165 246 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C PDS1P40316 373 aaPredicted RBP2.19□□□□□ -2.06
SDO1YLR022C YJL218WP40892 196 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C LSM1P47017 172 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C RPL9BP51401 191 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C ERG25P53045 309 aa2.19□□□□□ -2.06
SDO1YLR022C YGL118CP53132 145 aa2.19□□□□□ -2.06
SDO1YLR022C PRM8P53174 237 aa2.19□□□□□ -2.06
SDO1YLR022C YGL034CP53186 121 aa2.19□□□□□ -2.06
SDO1YLR022C YGR018CP53211 109 aa2.19□□□□□ -2.06
SDO1YLR022C CAX4P53223 239 aa2.19□□□□□ -2.06
SDO1YLR022C SWT21P53873 357 aaPredicted RBP2.19□□□□□ -2.06
SDO1YLR022C PLP1Q04004 230 aa2.19□□□□□ -2.06
SDO1YLR022C YLR050CQ12155 161 aaKnown RBP2.19□□□□□ -2.06
SDO1YLR022C AGC1Q12482 902 aa2.19□□□□□ -2.06
SDO1YLR022C NOT5Q12514 560 aaPredicted RBP2.19□□□□□ -2.06
SDO1YLR022C RPS28BP0C0X0 67 aaKnown RBP2.18□□□□□ -2.06
SDO1YLR022C CPR5P35176 225 aa2.18□□□□□ -2.06
SDO1YLR022C SRY1P36007 326 aa2.18□□□□□ -2.06
SDO1YLR022C IPT1P38954 527 aa2.18□□□□□ -2.06
SDO1YLR022C ASP1P38986 381 aaPredicted RBP2.18□□□□□ -2.06
SDO1YLR022C YKE4P40544 346 aa2.18□□□□□ -2.06
SDO1YLR022C JAC1P53193 184 aa2.18□□□□□ -2.06
SDO1YLR022C DID2P69771 204 aa2.18□□□□□ -2.06
SDO1YLR022C HSK3P69852 69 aa2.18□□□□□ -2.06
SDO1YLR022C ABF2Q02486 183 aa2.18□□□□□ -2.06
SDO1YLR022C MAK3Q03503 176 aa2.18□□□□□ -2.06
SDO1YLR022C YMD8Q03697 442 aa2.18□□□□□ -2.06
SDO1YLR022C SPC2Q04969 178 aa2.18□□□□□ -2.06
SDO1YLR022C TIR4Q12218 487 aaPredicted RBP2.18□□□□□ -2.06
SDO1YLR022C YPS3Q12303 508 aa2.18□□□□□ -2.06
SDO1YLR022C RPS28AQ3E7X9 67 aaPredicted RBP2.18□□□□□ -2.06
SDO1YLR022C YEL009C-AA0A023PZF2 135 aa2.17□□□□□ -2.06
SDO1YLR022C ADH1P00330 348 aaKnown RBP2.17□□□□□ -2.06
SDO1YLR022C YCR025CP25352 136 aa2.17□□□□□ -2.06
SDO1YLR022C PEX17P40155 199 aa2.17□□□□□ -2.06
SDO1YLR022C RFC2P40348 353 aa2.17□□□□□ -2.06
SDO1YLR022C NQM1P53228 333 aaPredicted RBP2.17□□□□□ -2.06
SDO1YLR022C LSM7P53905 115 aaKnown RBP2.17□□□□□ -2.06
SDO1YLR022C GAL83Q04739 417 aa2.17□□□□□ -2.06
SDO1YLR022C NSL1Q12143 216 aa2.17□□□□□ -2.06
SDO1YLR022C SMT3Q12306 101 aaKnown RBP2.17□□□□□ -2.06
SDO1YLR022C ATG40Q99325 256 aa2.17□□□□□ -2.06
SDO1YLR022C IGO2Q9P305 131 aa2.17□□□□□ -2.06
SDO1YLR022C ADK1P07170 222 aaKnown RBP2.16□□□□□ -2.06
SDO1YLR022C MRS1P07266 363 aa2.16□□□□□ -2.06
SDO1YLR022C CPT1P17898 393 aa2.16□□□□□ -2.06
SDO1YLR022C OAC1P32332 324 aa2.16□□□□□ -2.06
SDO1YLR022C DER1P38307 211 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms