RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YKL102C	P34249	101 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	UPS2	P35200	230 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	YBL071C	P38185	102 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	DOG2	P38773	246 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	DOG1	P38774	246 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	LST8	P41318	303 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	CAF40	P53829	373 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	DUG3	P53871	357 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	FRQ1	Q06389	190 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	MCH1	Q07376	486 aa		5.76	□□□□□ -1.49
PAM17	YKR065C	RPS25B	P0C0T4	108 aa	Known RBP	5.75	□□□□□ -1.49
PAM17	YKR065C	INO2	P26798	304 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	YPT31	P38555	223 aa	Known RBP	5.75	□□□□□ -1.49
PAM17	YKR065C	DFG10	P40526	253 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	ORM1	P53224	222 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	HCH1	P53834	153 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	YCL001W-A	P87012	153 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	PRR2	Q12310	699 aa		5.75	□□□□□ -1.49
PAM17	YKR065C	RPS25A	Q3E792	108 aa	Predicted RBP	5.75	□□□□□ -1.49
PAM17	YKR065C	UTP20	P35194	2493 aa	Known RBP	5.74	□□□□□ -1.49
PAM17	YKR065C	QCR9	P22289	66 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	EMP24	P32803	203 aa	Known RBP	5.74	□□□□□ -1.49
PAM17	YKR065C	SHB17	P36136	271 aa	Known RBP	5.74	□□□□□ -1.49
PAM17	YKR065C	YKR045C	P36138	183 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	WSS1	P38838	269 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	YDL186W	P48568	277 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	UBC12	P52491	188 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	DYN2	Q02647	92 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	SDH7	Q04401	133 aa		5.74	□□□□□ -1.49
PAM17	YKR065C	ZRC1	P20107	442 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	ECM25	P32525	599 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	MRPL38	P35996	138 aa	Predicted RBP	5.73	□□□□□ -1.49
PAM17	YKR065C	RRT1	P38192	103 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	SPC25	P40014	221 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	EMC5	P40540	141 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	SAS2	P40963	338 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	MIC27	P50945	234 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	BOR1	P53838	576 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	HOR7	Q05827	59 aa		5.73	□□□□□ -1.49
PAM17	YKR065C	PAA1	Q12447	191 aa	Known RBP	5.73	□□□□□ -1.49
PAM17	YKR065C	AVT5	P38176	459 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	CSH1	P38287	376 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	YNL194C	P40169	301 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	VPS55	P47111	140 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	RIB4	P50861	169 aa	Predicted RBP	5.72	□□□□□ -1.49
PAM17	YKR065C	CAB4	P53332	305 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	MSA1	Q08471	629 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	PRM3	Q08931	133 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	YGR035W-A	Q45U48	73 aa		5.72	□□□□□ -1.49
PAM17	YKR065C	SOD1	P00445	154 aa	Known RBP	5.71	□□□□□ -1.5
PAM17	YKR065C	PIS1	P06197	220 aa	Known RBP	5.71	□□□□□ -1.5
PAM17	YKR065C	YNK1	P36010	153 aa	Known RBP	5.71	□□□□□ -1.5
PAM17	YKR065C	QDR3	P38227	689 aa		5.71	□□□□□ -1.5
PAM17	YKR065C	VMA7	P39111	118 aa		5.71	□□□□□ -1.5
PAM17	YKR065C	YAR068W	P39564	161 aa		5.71	□□□□□ -1.5
PAM17	YKR065C	SYG1	P40528	902 aa		5.71	□□□□□ -1.5
PAM17	YKR065C	SMD3	P43321	101 aa	Known RBP	5.71	□□□□□ -1.5
PAM17	YKR065C	YCR041W	P37265	110 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	MIC12	P38341	106 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	BDH1	P39714	382 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	YGR269W	P40326	108 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	YJR015W	P47090	510 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	CRH1	P53301	507 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	YGR219W	P53307	113 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	POC4	Q12245	148 aa	Predicted RBP	5.7	□□□□□ -1.5
PAM17	YKR065C	MRPL23	Q12487	163 aa	Predicted RBP	5.7	□□□□□ -1.5
PAM17	YKR065C	FMP16	Q12497	93 aa		5.7	□□□□□ -1.5
PAM17	YKR065C	COX2	P00410	251 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	MRS4	P23500	304 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	YCR025C	P25352	136 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	CPD1	P53314	239 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	SWT21	P53873	357 aa	Predicted RBP	5.69	□□□□□ -1.5
PAM17	YKR065C	ATC1	Q04005	294 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	COA4	Q05809	96 aa		5.69	□□□□□ -1.5
PAM17	YKR065C	PBP4	Q07362	185 aa	Known RBP	5.69	□□□□□ -1.5
PAM17	YKR065C	ALK2	P32789	676 aa	Predicted RBP	5.68	□□□□□ -1.5
PAM17	YKR065C	POR2	P40478	281 aa		5.68	□□□□□ -1.5
PAM17	YKR065C	TOS8	P53147	276 aa		5.68	□□□□□ -1.5
PAM17	YKR065C	ODC1	Q03028	310 aa		5.68	□□□□□ -1.5
PAM17	YKR065C	TMA23	Q03525	211 aa		5.68	□□□□□ -1.5
PAM17	YKR065C	SHH3	Q04487	196 aa		5.68	□□□□□ -1.5
PAM17	YKR065C	SPO13	P23624	291 aa		5.67	□□□□□ -1.5
PAM17	YKR065C	AHT1	P29589	182 aa		5.67	□□□□□ -1.5
PAM17	YKR065C	MSK1	P32048	576 aa		5.67	□□□□□ -1.5
PAM17	YKR065C	LST7	P53237	242 aa		5.67	□□□□□ -1.5
PAM17	YKR065C	SDO1	Q07953	250 aa	Known RBP	5.67	□□□□□ -1.5
PAM17	YKR065C	COX19	Q3E731	98 aa		5.67	□□□□□ -1.5
PAM17	YKR065C	TDH1	P00360	332 aa	Known RBP	5.66	□□□□□ -1.5
PAM17	YKR065C	CYC3	P06182	269 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	CDC7	P06243	507 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	PET494	P07390	489 aa	Predicted RBP	5.66	□□□□□ -1.5
PAM17	YKR065C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
PAM17	YKR065C	YCR022C	P25620	114 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	POP5	P28005	173 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	LDS1	P31379	325 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	YPS1	P32329	569 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	SRB6	P32570	121 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	YBL059W	P34224	193 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	DER1	P38307	211 aa		5.66	□□□□□ -1.5
PAM17	YKR065C	YPI1	P43587	155 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 75.8 ms