RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SET3	YKR029C	YNL184C	P53876	108 aa		0.67	□□□□□ -2.3
SET3	YKR029C	MZM1	Q03429	123 aa	Predicted RBP	0.67	□□□□□ -2.3
SET3	YKR029C	YMR295C	Q03559	197 aa		0.67	□□□□□ -2.3
SET3	YKR029C	ATG38	Q05789	226 aa	Known RBP	0.67	□□□□□ -2.3
SET3	YKR029C	YOL024W	Q08172	172 aa		0.67	□□□□□ -2.3
SET3	YKR029C	DGA1	Q08650	418 aa		0.67	□□□□□ -2.3
SET3	YKR029C	YLR422W	Q06409	1932 aa		0.67	□□□□□ -2.3
SET3	YKR029C	LAA1	P39526	2014 aa		0.67	□□□□□ -2.3
SET3	YKR029C	POR1	P04840	283 aa	Known RBP	0.67	□□□□□ -2.3
SET3	YKR029C	QCR8	P08525	94 aa		0.67	□□□□□ -2.3
SET3	YKR029C	TRX3	P25372	127 aa		0.67	□□□□□ -2.3
SET3	YKR029C	ATP7	P30902	174 aa		0.67	□□□□□ -2.3
SET3	YKR029C	YBR220C	P38318	560 aa		0.67	□□□□□ -2.3
SET3	YKR029C	PHB1	P40961	287 aa		0.67	□□□□□ -2.3
SET3	YKR029C	ARO8	P53090	500 aa	Known RBP	0.67	□□□□□ -2.3
SET3	YKR029C	POP3	P53833	195 aa	Predicted RBP	0.67	□□□□□ -2.3
SET3	YKR029C	YLR162W	Q06235	118 aa		0.67	□□□□□ -2.3
SET3	YKR029C	YHR007C-A	Q07074	71 aa		0.67	□□□□□ -2.3
SET3	YKR029C	CSI2	Q08054	341 aa		0.67	□□□□□ -2.3
SET3	YKR029C	RAD28	Q12021	506 aa		0.67	□□□□□ -2.3
SET3	YKR029C	HFA1	P32874	2273 aa		0.66	□□□□□ -2.3
SET3	YKR029C	SEC11	P15367	167 aa		0.66	□□□□□ -2.3
SET3	YKR029C	FPR1	P20081	114 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	MTW1	P39731	289 aa		0.66	□□□□□ -2.3
SET3	YKR029C	SEC72	P39742	193 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	YER034W	P40022	185 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	ARP3	P47117	449 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	TDA4	P47153	279 aa		0.66	□□□□□ -2.3
SET3	YKR029C	GRX5	Q02784	150 aa		0.66	□□□□□ -2.3
SET3	YKR029C	SMD2	Q06217	110 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	NOC4	Q06512	552 aa	Predicted RBP	0.66	□□□□□ -2.3
SET3	YKR029C	YOL014W	Q08110	124 aa		0.66	□□□□□ -2.3
SET3	YKR029C	YAR023C	D6VPM8	179 aa		0.66	□□□□□ -2.3
SET3	YKR029C	HAP2	P06774	265 aa		0.66	□□□□□ -2.3
SET3	YKR029C	SPO13	P23624	291 aa		0.66	□□□□□ -2.3
SET3	YKR029C	ADE1	P27616	306 aa		0.66	□□□□□ -2.3
SET3	YKR029C	FMP32	P43557	207 aa		0.66	□□□□□ -2.3
SET3	YKR029C	YJR111C	P47148	283 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	YMR099C	Q03161	297 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	AIM34	Q03673	198 aa		0.66	□□□□□ -2.3
SET3	YKR029C	ARO80	Q04052	950 aa		0.66	□□□□□ -2.3
SET3	YKR029C	SHH3	Q04487	196 aa		0.66	□□□□□ -2.3
SET3	YKR029C	YMR315W	Q04869	349 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	GRX8	Q05926	109 aa		0.66	□□□□□ -2.3
SET3	YKR029C	YPR174C	Q06616	221 aa	Predicted RBP	0.66	□□□□□ -2.3
SET3	YKR029C	YOR342C	Q12182	319 aa		0.66	□□□□□ -2.3
SET3	YKR029C	YML100W-A	Q8TGT0	57 aa		0.66	□□□□□ -2.3
SET3	YKR029C	POL2	P21951	2222 aa	Known RBP	0.66	□□□□□ -2.3
SET3	YKR029C	SEC14	P24280	304 aa	Known RBP	0.65	□□□□□ -2.31
SET3	YKR029C	UPS2	P35200	230 aa		0.65	□□□□□ -2.31
SET3	YKR029C	EGD2	P38879	174 aa	Known RBP	0.65	□□□□□ -2.31
SET3	YKR029C	CUP9	P41817	306 aa		0.65	□□□□□ -2.31
SET3	YKR029C	UBC12	P52491	188 aa		0.65	□□□□□ -2.31
SET3	YKR029C	NRK1	P53915	240 aa		0.65	□□□□□ -2.31
SET3	YKR029C	VPS71	Q03433	280 aa		0.65	□□□□□ -2.31
SET3	YKR029C	YOR097C	Q12274	175 aa	Predicted RBP	0.65	□□□□□ -2.31
SET3	YKR029C	RPL2A	P0CX45	254 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	RPL2B	P0CX46	254 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	NSP1	P14907	823 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	APA2	P22108	325 aa		0.64	□□□□□ -2.31
SET3	YKR029C	MGT1	P26188	188 aa		0.64	□□□□□ -2.31
SET3	YKR029C	NSG1	P38837	291 aa		0.64	□□□□□ -2.31
SET3	YKR029C	EMC4	P53073	190 aa		0.64	□□□□□ -2.31
SET3	YKR029C	JAC1	P53193	184 aa		0.64	□□□□□ -2.31
SET3	YKR029C	MPC3	P53311	146 aa		0.64	□□□□□ -2.31
SET3	YKR029C	PGA1	P53896	198 aa		0.64	□□□□□ -2.31
SET3	YKR029C	RCE1	Q03530	315 aa		0.64	□□□□□ -2.31
SET3	YKR029C	IRC23	Q08416	157 aa		0.64	□□□□□ -2.31
SET3	YKR029C	MPD1	Q12404	318 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	YLR412C-A	Q3E742	68 aa		0.64	□□□□□ -2.31
SET3	YKR029C	BRR2	P32639	2163 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	RIF1	P29539	1916 aa		0.64	□□□□□ -2.31
SET3	YKR029C	MAK31	P23059	88 aa		0.64	□□□□□ -2.31
SET3	YKR029C	AHC2	P25649	128 aa		0.64	□□□□□ -2.31
SET3	YKR029C	TRR1	P29509	319 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	SFK1	P35735	353 aa		0.64	□□□□□ -2.31
SET3	YKR029C	VPS51	P36116	164 aa		0.64	□□□□□ -2.31
SET3	YKR029C	EDC3	P39998	551 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	RIO2	P40160	425 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	YPL073C	P40323	161 aa		0.64	□□□□□ -2.31
SET3	YKR029C	POG1	P40473	351 aa		0.64	□□□□□ -2.31
SET3	YKR029C	YNL247W	P53852	767 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	SNO1	Q03144	224 aa		0.64	□□□□□ -2.31
SET3	YKR029C	PLP1	Q04004	230 aa		0.64	□□□□□ -2.31
SET3	YKR029C	HPT1	Q04178	221 aa	Known RBP	0.64	□□□□□ -2.31
SET3	YKR029C	SHH4	Q06236	168 aa		0.64	□□□□□ -2.31
SET3	YKR029C	PRP11	Q07350	266 aa	Predicted RBP	0.64	□□□□□ -2.31
SET3	YKR029C	YNL146C-A	Q3E7Z1	64 aa		0.64	□□□□□ -2.31
SET3	YKR029C	MDM35	O60200	86 aa		0.63	□□□□□ -2.31
SET3	YKR029C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
SET3	YKR029C	RME1	P32338	300 aa	Known RBP	0.63	□□□□□ -2.31
SET3	YKR029C	VMA22	P38784	181 aa		0.63	□□□□□ -2.31
SET3	YKR029C	YER076C	P40049	302 aa		0.63	□□□□□ -2.31
SET3	YKR029C	YMR253C	Q04835	414 aa		0.63	□□□□□ -2.31
SET3	YKR029C	ATG10	Q07879	167 aa		0.63	□□□□□ -2.31
SET3	YKR029C	TIR1	P10863	254 aa		0.63	□□□□□ -2.31
SET3	YKR029C	PAM17	P36147	197 aa		0.63	□□□□□ -2.31
SET3	YKR029C	SRP14	P38985	146 aa		0.63	□□□□□ -2.31
SET3	YKR029C	SPC25	P40014	221 aa		0.63	□□□□□ -2.31
SET3	YKR029C	NSA2	P40078	261 aa	Known RBP	0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms