RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ATG40Q99325 256 aa1.46□□□□□ -2.18
SHE2YKL130C POR1P04840 283 aaKnown RBP1.45□□□□□ -2.18
SHE2YKL130C SPO13P23624 291 aa1.45□□□□□ -2.18
SHE2YKL130C YBR209WP38311 105 aa1.45□□□□□ -2.18
SHE2YKL130C BOL2P53082 120 aa1.45□□□□□ -2.18
SHE2YKL130C YMR099CQ03161 297 aaKnown RBP1.45□□□□□ -2.18
SHE2YKL130C YDR476CQ03362 224 aa1.45□□□□□ -2.18
SHE2YKL130C YMR295CQ03559 197 aa1.45□□□□□ -2.18
SHE2YKL130C DGK1Q12382 290 aa1.45□□□□□ -2.18
SHE2YKL130C TAO3P40468 2376 aa1.45□□□□□ -2.18
SHE2YKL130C FIG2P25653 1609 aa1.44□□□□□ -2.18
SHE2YKL130C RAD50P12753 1312 aa1.44□□□□□ -2.18
SHE2YKL130C YHR022CP38763 256 aa1.44□□□□□ -2.18
SHE2YKL130C VTC1P40046 129 aaRIP-Chip data1.44□□□□□ -2.18not detected
SHE2YKL130C MOB1P40484 314 aa1.44□□□□□ -2.18
SHE2YKL130C YFL019CP43576 117 aa1.44□□□□□ -2.18
SHE2YKL130C SBH2P52871 88 aa1.44□□□□□ -2.18
SHE2YKL130C YNR077CP53758 84 aa1.44□□□□□ -2.18
SHE2YKL130C HSK3P69852 69 aa1.44□□□□□ -2.18
SHE2YKL130C SHH3Q04487 196 aa1.44□□□□□ -2.18
SHE2YKL130C NAT3Q06504 195 aa1.44□□□□□ -2.18
SHE2YKL130C YDL180WQ12301 547 aa1.44□□□□□ -2.18
SHE2YKL130C FAS2P19097 1887 aaKnown RBP1.43□□□□□ -2.18
SHE2YKL130C YPR117WQ06116 2489 aa1.43□□□□□ -2.18
SHE2YKL130C RAS2P01120 322 aaKnown RBP1.43□□□□□ -2.18
SHE2YKL130C NSP1P14907 823 aaKnown RBP1.43□□□□□ -2.18
SHE2YKL130C MAK31P23059 88 aa1.43□□□□□ -2.18
SHE2YKL130C TFC1P32367 649 aa1.43□□□□□ -2.18
SHE2YKL130C AGE2P40529 298 aa1.43□□□□□ -2.18
SHE2YKL130C CUP9P41817 306 aa1.43□□□□□ -2.18
SHE2YKL130C TTI2P47168 421 aa1.43□□□□□ -2.18
SHE2YKL130C TIM13P53299 105 aa1.43□□□□□ -2.18
SHE2YKL130C SAY1P53324 424 aa1.43□□□□□ -2.18
SHE2YKL130C RGM1Q00453 211 aa1.43□□□□□ -2.18
SHE2YKL130C CYT2Q00873 224 aa1.43□□□□□ -2.18
SHE2YKL130C EFG1Q3E705 233 aaKnown RBP1.43□□□□□ -2.18
SHE2YKL130C PET20Q99373 253 aa1.43□□□□□ -2.18
SHE2YKL130C PMD1P32634 1753 aa1.43□□□□□ -2.18
SHE2YKL130C UTP10P42945 1769 aaKnown RBP1.42□□□□□ -2.18
SHE2YKL130C YLR236CA0A023PZG4 107 aa1.42□□□□□ -2.18
SHE2YKL130C DDI2P0CH63 225 aa1.42□□□□□ -2.18
SHE2YKL130C DDI3P0CH64 225 aa1.42□□□□□ -2.18
SHE2YKL130C PBI2P0CT04 75 aaKnown RBP1.42□□□□□ -2.18
SHE2YKL130C TIR1P10863 254 aa1.42□□□□□ -2.18
SHE2YKL130C BUB2P26448 306 aaPredicted RBP1.42□□□□□ -2.18
SHE2YKL130C FZF1P32805 299 aa1.42□□□□□ -2.18
SHE2YKL130C NUF2P33895 451 aa1.42□□□□□ -2.18
SHE2YKL130C SRP102P36057 244 aaPredicted RBP1.42□□□□□ -2.18
SHE2YKL130C DSE2P38844 325 aa1.42□□□□□ -2.18
SHE2YKL130C TVP23P38962 199 aa1.42□□□□□ -2.18
SHE2YKL130C SPC25P40014 221 aa1.42□□□□□ -2.18
SHE2YKL130C NSA2P40078 261 aaKnown RBP1.42□□□□□ -2.18
SHE2YKL130C ERJ5P43613 295 aaPredicted RBP1.42□□□□□ -2.18
SHE2YKL130C DAN1P47178 298 aa1.42□□□□□ -2.18
SHE2YKL130C YGL101WP53144 215 aa1.42□□□□□ -2.18
SHE2YKL130C MPC3P53311 146 aa1.42□□□□□ -2.18
SHE2YKL130C GRX5Q02784 150 aa1.42□□□□□ -2.18
SHE2YKL130C CUE4Q04201 117 aaPredicted RBP1.42□□□□□ -2.18
SHE2YKL130C DAS2Q12084 232 aa1.42□□□□□ -2.18
SHE2YKL130C BOL1Q3E793 110 aa1.42□□□□□ -2.18
SHE2YKL130C GSC2P40989 1895 aa1.41□□□□□ -2.18
SHE2YKL130C HKR1P41809 1802 aa1.41□□□□□ -2.18
SHE2YKL130C HAP2P06774 265 aa1.41□□□□□ -2.18
SHE2YKL130C MDH2P22133 377 aa1.41□□□□□ -2.18
SHE2YKL130C YCR023CP25351 611 aa1.41□□□□□ -2.18
SHE2YKL130C GAA1P39012 614 aa1.41□□□□□ -2.18
SHE2YKL130C GLR1P41921 483 aaKnown RBP1.41□□□□□ -2.18
SHE2YKL130C YJL027CP47063 138 aaPredicted RBP1.41□□□□□ -2.18
SHE2YKL130C NQM1P53228 333 aaPredicted RBP1.41□□□□□ -2.18
SHE2YKL130C BUD25P85052 153 aa1.41□□□□□ -2.18
SHE2YKL130C THI74Q04083 370 aa1.41□□□□□ -2.18
SHE2YKL130C YMR253CQ04835 414 aa1.41□□□□□ -2.18
SHE2YKL130C YMR321CQ04898 105 aa1.41□□□□□ -2.18
SHE2YKL130C YPR127WQ06494 345 aa1.41□□□□□ -2.18
SHE2YKL130C YOR214CQ12282 236 aa1.41□□□□□ -2.18
SHE2YKL130C FAS1P07149 2051 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C UBI4P0CG63 381 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C IDP1P21954 428 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C PEX34P25584 144 aa1.4□□□□□ -2.19
SHE2YKL130C NRG2P38082 220 aa1.4□□□□□ -2.19
SHE2YKL130C YNL200CP40165 246 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C YFR054CP43622 192 aa1.4□□□□□ -2.19
SHE2YKL130C LSM1P47017 172 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C MOG1P47123 218 aa1.4□□□□□ -2.19
SHE2YKL130C KNH1P50112 268 aa1.4□□□□□ -2.19
SHE2YKL130C SOL1P50278 321 aa1.4□□□□□ -2.19
SHE2YKL130C SBH1P52870 82 aa1.4□□□□□ -2.19
SHE2YKL130C POP3P53833 195 aaPredicted RBP1.4□□□□□ -2.19
SHE2YKL130C LSM3P57743 89 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C VPS28Q02767 242 aa1.4□□□□□ -2.19
SHE2YKL130C DIG2Q03373 323 aaKnown RBP1.4□□□□□ -2.19
SHE2YKL130C RRP17Q04031 235 aaPredicted RBP1.4□□□□□ -2.19
SHE2YKL130C GAL83Q04739 417 aa1.4□□□□□ -2.19
SHE2YKL130C SML1Q04964 104 aa1.4□□□□□ -2.19
SHE2YKL130C ANT1Q06497 328 aa1.4□□□□□ -2.19
SHE2YKL130C IRC23Q08416 157 aa1.4□□□□□ -2.19
SHE2YKL130C YLR046CQ12253 270 aa1.4□□□□□ -2.19
SHE2YKL130C PET54P10834 293 aa1.39□□□□□ -2.19
SHE2YKL130C SEC11P15367 167 aa1.39□□□□□ -2.19
SHE2YKL130C STP22P25604 385 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms