RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YEL045CP32616 141 aa3.19□□□□□ -1.9
TFA1YKL028W DOC1P53068 250 aa3.19□□□□□ -1.9
TFA1YKL028W SAE3P89114 91 aa3.19□□□□□ -1.9
TFA1YKL028W YMR253CQ04835 414 aa3.19□□□□□ -1.9
TFA1YKL028W FCF2Q12035 217 aaPredicted RBP3.19□□□□□ -1.9
TFA1YKL028W YPR063CQ12160 140 aa3.19□□□□□ -1.9
TFA1YKL028W DDI2P0CH63 225 aa3.18□□□□□ -1.9
TFA1YKL028W DDI3P0CH64 225 aa3.18□□□□□ -1.9
TFA1YKL028W DDR48P18899 430 aaKnown RBP3.18□□□□□ -1.9
TFA1YKL028W RRT1P38192 103 aa3.18□□□□□ -1.9
TFA1YKL028W GEP7P53171 287 aa3.18□□□□□ -1.9
TFA1YKL028W HAL1Q01766 294 aa3.18□□□□□ -1.9
TFA1YKL028W CWC27Q02770 301 aa3.18□□□□□ -1.9
TFA1YKL028W ANT1Q06497 328 aa3.18□□□□□ -1.9
TFA1YKL028W DUR1,2P32528 1835 aaKnown RBP3.17□□□□□ -1.9
TFA1YKL028W YHR180WP38868 163 aa3.17□□□□□ -1.9
TFA1YKL028W EAF6P47128 113 aa3.17□□□□□ -1.9
TFA1YKL028W YNR064CP53750 290 aa3.17□□□□□ -1.9
TFA1YKL028W ELC1Q03071 99 aa3.17□□□□□ -1.9
TFA1YKL028W TVP18Q04767 167 aa3.17□□□□□ -1.9
TFA1YKL028W SPP41P38904 1435 aa3.16□□□□□ -1.9
TFA1YKL028W BUD23P25627 275 aaPredicted RBP3.16□□□□□ -1.9
TFA1YKL028W YER135CP40082 130 aa3.16□□□□□ -1.9
TFA1YKL028W EMC4P53073 190 aa3.16□□□□□ -1.9
TFA1YKL028W MYO2P19524 1574 aaKnown RBP3.15□□□□□ -1.91
TFA1YKL028W GPA2P10823 449 aa3.15□□□□□ -1.91
TFA1YKL028W PAM17P36147 197 aa3.15□□□□□ -1.91
TFA1YKL028W YEL073CP39974 107 aa3.15□□□□□ -1.91
TFA1YKL028W RIO2P40160 425 aaKnown RBP3.15□□□□□ -1.91
TFA1YKL028W RPS12P48589 143 aaKnown RBP3.15□□□□□ -1.91
TFA1YKL028W LIP1Q03579 150 aa3.15□□□□□ -1.91
TFA1YKL028W RRT7Q07829 113 aa3.15□□□□□ -1.91
TFA1YKL028W HSL1P34244 1518 aa3.15□□□□□ -1.91
TFA1YKL028W NOP1P15646 327 aaKnown RBP3.14□□□□□ -1.91
TFA1YKL028W ANB1P19211 157 aa3.14□□□□□ -1.91
TFA1YKL028W FZF1P32805 299 aa3.14□□□□□ -1.91
TFA1YKL028W YET1P35723 206 aa3.14□□□□□ -1.91
TFA1YKL028W ETR1P38071 380 aa3.14□□□□□ -1.91
TFA1YKL028W PIR5P46999 287 aa3.14□□□□□ -1.91
TFA1YKL028W RNH202Q05635 350 aa3.14□□□□□ -1.91
TFA1YKL028W TMC1Q08422 150 aaPredicted RBP3.14□□□□□ -1.91
TFA1YKL028W YOR381W-AQ3E804 55 aa3.14□□□□□ -1.91
TFA1YKL028W KTI11Q3E840 82 aa3.14□□□□□ -1.91
TFA1YKL028W MRS4P23500 304 aa3.13□□□□□ -1.91
TFA1YKL028W SCM4P32564 187 aa3.13□□□□□ -1.91
TFA1YKL028W MRPS9P38120 278 aa3.13□□□□□ -1.91
TFA1YKL028W RPB11P38902 120 aa3.13□□□□□ -1.91
TFA1YKL028W YNL217WP40152 326 aa3.13□□□□□ -1.91
TFA1YKL028W PHS1P40857 217 aa3.13□□□□□ -1.91
TFA1YKL028W ATG10Q07879 167 aa3.13□□□□□ -1.91
TFA1YKL028W ZEO1Q08245 113 aa3.13□□□□□ -1.91
TFA1YKL028W HUT1Q12520 339 aa3.13□□□□□ -1.91
TFA1YKL028W UBR1P19812 1950 aa3.13□□□□□ -1.91
TFA1YKL028W SPS2P08459 502 aa3.12□□□□□ -1.91
TFA1YKL028W YER039C-AP0CD97 72 aa3.12□□□□□ -1.91
TFA1YKL028W UTH1P36135 365 aa3.12□□□□□ -1.91
TFA1YKL028W YPT31P38555 223 aaKnown RBP3.12□□□□□ -1.91
TFA1YKL028W YLR042CQ07990 161 aa3.12□□□□□ -1.91
TFA1YKL028W IRC23Q08416 157 aa3.12□□□□□ -1.91
TFA1YKL028W ATG40Q99325 256 aa3.12□□□□□ -1.91
TFA1YKL028W YOL162WP0CF19 215 aa3.11□□□□□ -1.91
TFA1YKL028W RPL33BP41056 107 aaKnown RBP3.11□□□□□ -1.91
TFA1YKL028W PAC10P48363 199 aa3.11□□□□□ -1.91
TFA1YKL028W SPG1P50088 95 aa3.11□□□□□ -1.91
TFA1YKL028W YNR077CP53758 84 aa3.11□□□□□ -1.91
TFA1YKL028W GRX5Q02784 150 aa3.11□□□□□ -1.91
TFA1YKL028W RIM9Q04734 239 aa3.11□□□□□ -1.91
TFA1YKL028W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
TFA1YKL028W BUD4P47136 1447 aa3.11□□□□□ -1.91
TFA1YKL028W RPS23AP0CX29 145 aaKnown RBP3.1□□□□□ -1.91
TFA1YKL028W RPS23BP0CX30 145 aa3.1□□□□□ -1.91
TFA1YKL028W MDH2P22133 377 aa3.1□□□□□ -1.91
TFA1YKL028W SFT2P38166 215 aa3.1□□□□□ -1.91
TFA1YKL028W SAY1P53324 424 aa3.1□□□□□ -1.91
TFA1YKL028W SCS22Q6Q595 175 aa3.1□□□□□ -1.91
TFA1YKL028W YCL001W-BQ96VH2 84 aa3.1□□□□□ -1.91
TFA1YKL028W DDP1Q99321 188 aaKnown RBP3.1□□□□□ -1.91
TFA1YKL028W TY1B-HO13535 1793 aa3.1□□□□□ -1.91
TFA1YKL028W YLR422WQ06409 1932 aa3.1□□□□□ -1.91
TFA1YKL028W TSC11P40061 1430 aa3.1□□□□□ -1.91
TFA1YKL028W VAR1P02381 398 aa3.1□□□□□ -1.91
TFA1YKL028W YCR050CP25630 102 aa3.1□□□□□ -1.91
TFA1YKL028W YOR062CP36025 268 aa3.1□□□□□ -1.91
TFA1YKL028W TVP23P38962 199 aa3.1□□□□□ -1.91
TFA1YKL028W MPM1P40364 252 aa3.1□□□□□ -1.91
TFA1YKL028W YDR114CQ04597 100 aa3.1□□□□□ -1.91
TFA1YKL028W CSI2Q08054 341 aa3.1□□□□□ -1.91
TFA1YKL028W RAS2P01120 322 aaKnown RBP3.09□□□□□ -1.92
TFA1YKL028W RPL26AP05743 127 aaKnown RBP3.09□□□□□ -1.92
TFA1YKL028W GAT4P40569 121 aa3.09□□□□□ -1.92
TFA1YKL028W YGL230CP53074 147 aa3.09□□□□□ -1.92
TFA1YKL028W RPL26BP53221 127 aaKnown RBP3.09□□□□□ -1.92
TFA1YKL028W FEX1Q08913 375 aa3.09□□□□□ -1.92
TFA1YKL028W FEX2Q08991 375 aa3.09□□□□□ -1.92
TFA1YKL028W SPA2P23201 1466 aaKnown RBP3.08□□□□□ -1.92
TFA1YKL028W YER084WP40057 128 aa3.08□□□□□ -1.92
TFA1YKL028W YIL059CP40520 121 aa3.08□□□□□ -1.92
TFA1YKL028W BOL2P53082 120 aa3.08□□□□□ -1.92
TFA1YKL028W UIP4Q08926 304 aa3.08□□□□□ -1.92
TFA1YKL028W YLR236CA0A023PZG4 107 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms