RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YDR114CQ04597 100 aa2.74□□□□□ -1.97
UBP12YJL197W RKR1Q04781 1562 aa2.74□□□□□ -1.97
UBP12YJL197W GEA2P39993 1459 aaKnown RBP2.74□□□□□ -1.97
UBP12YJL197W NMT1P14743 455 aa2.74□□□□□ -1.97
UBP12YJL197W AHT1P29589 182 aa2.74□□□□□ -1.97
UBP12YJL197W YET1P35723 206 aa2.74□□□□□ -1.97
UBP12YJL197W YIR035CP40579 254 aa2.74□□□□□ -1.97
UBP12YJL197W MPC3P53311 146 aa2.74□□□□□ -1.97
UBP12YJL197W YNR062CP53748 327 aa2.73□□□□□ -1.97
UBP12YJL197W FCF2Q12035 217 aaPredicted RBP2.73□□□□□ -1.97
UBP12YJL197W BOL1Q3E793 110 aa2.73□□□□□ -1.97
UBP12YJL197W UTH1P36135 365 aa2.73□□□□□ -1.97
UBP12YJL197W YJL218WP40892 196 aaKnown RBP2.73□□□□□ -1.97
UBP12YJL197W SBH1P52870 82 aa2.73□□□□□ -1.97
UBP12YJL197W YPL225WQ08971 146 aaKnown RBP2.73□□□□□ -1.97
UBP12YJL197W FYV7Q12247 151 aa2.73□□□□□ -1.97
UBP12YJL197W SKI3P17883 1432 aaKnown RBP2.73□□□□□ -1.97
UBP12YJL197W RPL14AP36105 138 aaKnown RBP2.73□□□□□ -1.97
UBP12YJL197W RPL14BP38754 138 aaKnown RBP2.73□□□□□ -1.97
UBP12YJL197W YHR140WP38842 239 aa2.73□□□□□ -1.97
UBP12YJL197W YEL028WP39989 153 aa2.73□□□□□ -1.97
UBP12YJL197W RRT1P38192 103 aa2.72□□□□□ -1.97
UBP12YJL197W YMR253CQ04835 414 aa2.72□□□□□ -1.97
UBP12YJL197W FYV12Q08559 129 aa2.72□□□□□ -1.97
UBP12YJL197W RAS2P01120 322 aaKnown RBP2.72□□□□□ -1.97
UBP12YJL197W YBL010CP32788 280 aa2.72□□□□□ -1.97
UBP12YJL197W YEL073CP39974 107 aa2.72□□□□□ -1.97
UBP12YJL197W AIM11P87275 137 aa2.72□□□□□ -1.97
UBP12YJL197W ATG40Q99325 256 aa2.72□□□□□ -1.97
UBP12YJL197W RPL26AP05743 127 aaKnown RBP2.72□□□□□ -1.97
UBP12YJL197W RPL33BP41056 107 aaKnown RBP2.72□□□□□ -1.97
UBP12YJL197W GEP7P53171 287 aa2.72□□□□□ -1.97
UBP12YJL197W RPL26BP53221 127 aaKnown RBP2.72□□□□□ -1.97
UBP12YJL197W EST3Q03096 181 aa2.72□□□□□ -1.97
UBP12YJL197W YPR114WQ06107 315 aa2.72□□□□□ -1.97
UBP12YJL197W LDB18Q07887 179 aa2.72□□□□□ -1.97
UBP12YJL197W GPA2P10823 449 aa2.71□□□□□ -1.98
UBP12YJL197W YNR064CP53750 290 aa2.71□□□□□ -1.98
UBP12YJL197W SCW10Q04951 389 aa2.71□□□□□ -1.98
UBP12YJL197W YLR118CQ12354 227 aa2.71□□□□□ -1.98
UBP12YJL197W RPS23AP0CX29 145 aaKnown RBP2.71□□□□□ -1.98
UBP12YJL197W RPS23BP0CX30 145 aa2.71□□□□□ -1.98
UBP12YJL197W DDR48P18899 430 aaKnown RBP2.71□□□□□ -1.98
UBP12YJL197W PAC10P48363 199 aa2.71□□□□□ -1.98
UBP12YJL197W ELC1Q03071 99 aa2.71□□□□□ -1.98
UBP12YJL197W FEX1Q08913 375 aa2.71□□□□□ -1.98
UBP12YJL197W FEX2Q08991 375 aa2.71□□□□□ -1.98
UBP12YJL197W ATG10Q07879 167 aa2.71□□□□□ -1.98
UBP12YJL197W TRS20P38334 175 aa2.7□□□□□ -1.98
UBP12YJL197W YIL059CP40520 121 aa2.7□□□□□ -1.98
UBP12YJL197W RRT7Q07829 113 aa2.7□□□□□ -1.98
UBP12YJL197W YOR381W-AQ3E804 55 aa2.7□□□□□ -1.98
UBP12YJL197W SIN3P22579 1536 aa2.7□□□□□ -1.98
UBP12YJL197W UTP11P34247 250 aaPredicted RBP2.7□□□□□ -1.98
UBP12YJL197W YER135CP40082 130 aa2.7□□□□□ -1.98
UBP12YJL197W SFT1P43682 97 aa2.7□□□□□ -1.98
UBP12YJL197W BUD25P85052 153 aa2.7□□□□□ -1.98
UBP12YJL197W LIP1Q03579 150 aa2.7□□□□□ -1.98
UBP12YJL197W ANT1Q06497 328 aa2.7□□□□□ -1.98
UBP12YJL197W ADK1P07170 222 aaKnown RBP2.7□□□□□ -1.98
UBP12YJL197W LHP1P33399 275 aaKnown RBP2.7□□□□□ -1.98
UBP12YJL197W EAF6P47128 113 aa2.7□□□□□ -1.98
UBP12YJL197W FZF1P32805 299 aa2.69□□□□□ -1.98
UBP12YJL197W RIO2P40160 425 aaKnown RBP2.69□□□□□ -1.98
UBP12YJL197W EMC4P53073 190 aa2.69□□□□□ -1.98
UBP12YJL197W NTE1Q04958 1679 aa2.69□□□□□ -1.98
UBP12YJL197W YNL217WP40152 326 aa2.69□□□□□ -1.98
UBP12YJL197W PIR5P46999 287 aa2.69□□□□□ -1.98
UBP12YJL197W TVP18Q04767 167 aa2.69□□□□□ -1.98
UBP12YJL197W SNT2P53127 1403 aa2.68□□□□□ -1.98
UBP12YJL197W ESP1Q03018 1630 aa2.68□□□□□ -1.98
UBP12YJL197W PAM17P36147 197 aa2.68□□□□□ -1.98
UBP12YJL197W YPT31P38555 223 aaKnown RBP2.68□□□□□ -1.98
UBP12YJL197W SAE3P89114 91 aa2.68□□□□□ -1.98
UBP12YJL197W IRC23Q08416 157 aa2.68□□□□□ -1.98
UBP12YJL197W TIR3P40552 269 aa2.68□□□□□ -1.98
UBP12YJL197W SPG1P50088 95 aa2.68□□□□□ -1.98
UBP12YJL197W YOR015WQ12169 119 aa2.68□□□□□ -1.98
UBP12YJL197W YBR209WP38311 105 aa2.67□□□□□ -1.98
UBP12YJL197W BOL2P53082 120 aa2.67□□□□□ -1.98
UBP12YJL197W SVP26P38869 228 aa2.67□□□□□ -1.98
UBP12YJL197W AIM36Q03798 255 aa2.67□□□□□ -1.98
UBP12YJL197W SCS22Q6Q595 175 aa2.67□□□□□ -1.98
UBP12YJL197W TY1B-BRQ12193 1756 aa2.67□□□□□ -1.98
UBP12YJL197W TY1B-GR3Q12316 1755 aa2.67□□□□□ -1.98
UBP12YJL197W TY1B-ORQ92393 1755 aa2.67□□□□□ -1.98
UBP12YJL197W ANB1P19211 157 aa2.66□□□□□ -1.98
UBP12YJL197W TMA23Q03525 211 aa2.66□□□□□ -1.98
UBP12YJL197W YOL162WP0CF19 215 aa2.66□□□□□ -1.98
UBP12YJL197W GSP1P32835 219 aaKnown RBP2.66□□□□□ -1.98
UBP12YJL197W GSP2P32836 220 aaKnown RBP2.66□□□□□ -1.98
UBP12YJL197W ATP19P81451 68 aa2.66□□□□□ -1.98
UBP12YJL197W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
UBP12YJL197W MMS1Q06211 1407 aa2.66□□□□□ -1.98
UBP12YJL197W NOP1P15646 327 aaKnown RBP2.66□□□□□ -1.98
UBP12YJL197W MRS4P23500 304 aa2.66□□□□□ -1.98
UBP12YJL197W CIS3P47001 227 aa2.66□□□□□ -1.98
UBP12YJL197W YNR077CP53758 84 aa2.66□□□□□ -1.98
UBP12YJL197W CWC27Q02770 301 aa2.66□□□□□ -1.98
UBP12YJL197W CUE4Q04201 117 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms