RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	YNR071C	P53757	342 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	NRG1	Q03125	231 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	PHO92	Q06390	306 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	RPL24B	P24000	155 aa	Known RBP	3.88	□□□□□ -1.79
RSC30	YHR056C	SFT2	P38166	215 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	YPS5	P53057	165 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	YGR017W	P53210	297 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	AYT1	Q12226	474 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	ACP1	P32463	125 aa		3.88	□□□□□ -1.79
RSC30	YHR056C	TMA20	P89886	181 aa	Predicted RBP	3.88	□□□□□ -1.79
RSC30	YHR056C	GPX2	P38143	162 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	PRE5	P40302	234 aa	Known RBP	3.87	□□□□□ -1.79
RSC30	YHR056C	CPR8	P53728	308 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	BOR1	P53838	576 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	VAR1	P02381	398 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	SPI1	P40092	148 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	YIF1	P53845	314 aa	Known RBP	3.87	□□□□□ -1.79
RSC30	YHR056C	USV1	Q12132	391 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	ISN1	Q99312	450 aa		3.87	□□□□□ -1.79
RSC30	YHR056C	MRPL20	P22354	195 aa	Predicted RBP	3.86	□□□□□ -1.79
RSC30	YHR056C	YBR013C	P38215	129 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	ASP1	P38986	381 aa	Predicted RBP	3.86	□□□□□ -1.79
RSC30	YHR056C	YIL077C	P40508	320 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	GVP36	P40531	326 aa	Known RBP	3.86	□□□□□ -1.79
RSC30	YHR056C	YJL028W	P47062	111 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	PDR17	P53844	350 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	NGL1	Q08213	363 aa	Known RBP	3.86	□□□□□ -1.79
RSC30	YHR056C	TRM13	Q12383	476 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	YPR010C-A	A5Z2X5	72 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	ARG80	P07249	177 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	TIR2	P33890	251 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	SWM2	P40342	146 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	NUP42	P49686	430 aa	Known RBP	3.86	□□□□□ -1.79
RSC30	YHR056C	TOM7	P53507	60 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	VPS28	Q02767	242 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	ERV2	Q12284	196 aa		3.86	□□□□□ -1.79
RSC30	YHR056C	CPT1	P17898	393 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	MIC27	P50945	234 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	PRM4	Q12498	284 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	PUT1	P09368	476 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	YCR016W	P25617	290 aa	Known RBP	3.85	□□□□□ -1.79
RSC30	YHR056C	COQ3	P27680	312 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	JLP2	P40206	208 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	ODC1	Q03028	310 aa		3.85	□□□□□ -1.79
RSC30	YHR056C	YDR157W	A0A023PZE8	133 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	FCY2	P17064	533 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	SEC22	P22214	214 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	MRPL3	P36516	390 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	YHR122W	P38829	231 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	GPG1	P53130	126 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	TMA23	Q03525	211 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	YMR090W	Q04304	227 aa	Known RBP	3.84	□□□□□ -1.79
RSC30	YHR056C	YMR253C	Q04835	414 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	POC4	Q12245	148 aa	Predicted RBP	3.84	□□□□□ -1.79
RSC30	YHR056C	YLL066W-B	Q8TGJ7	56 aa		3.84	□□□□□ -1.79
RSC30	YHR056C	RNA15	P25299	296 aa	Predicted RBP	3.84	□□□□□ -1.8
RSC30	YHR056C	PET100	P38958	111 aa		3.84	□□□□□ -1.8
RSC30	YHR056C	PBA1	Q05778	276 aa		3.84	□□□□□ -1.8
RSC30	YHR056C	SUA5	P32579	426 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	SLM6	P38343	150 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	PEX7	P39108	375 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	HPA3	P39979	161 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	YFL067W	P43537	175 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	YDR366C	P87287	132 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	AIM45	Q12480	344 aa	Known RBP	3.83	□□□□□ -1.8
RSC30	YHR056C	EMC5	P40540	141 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	PKP2	P53170	491 aa		3.83	□□□□□ -1.8
RSC30	YHR056C	ERI1	P62651	68 aa	Known RBP	3.83	□□□□□ -1.8
RSC30	YHR056C	YLR179C	Q06252	201 aa	Known RBP	3.83	□□□□□ -1.8
RSC30	YHR056C	HTZ1	Q12692	134 aa	Known RBP	3.83	□□□□□ -1.8
RSC30	YHR056C	RPS25B	P0C0T4	108 aa	Known RBP	3.82	□□□□□ -1.8
RSC30	YHR056C	YGR025W	P53216	100 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	ERP1	Q05359	219 aa	Known RBP	3.82	□□□□□ -1.8
RSC30	YHR056C	SDO1	Q07953	250 aa	Known RBP	3.82	□□□□□ -1.8
RSC30	YHR056C	ATX2	Q12067	313 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	NKP1	Q12493	238 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	RPS25A	Q3E792	108 aa	Predicted RBP	3.82	□□□□□ -1.8
RSC30	YHR056C	YHR213W-A	Q8TGT4	77 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	YLR302C	O13544	120 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	MRP10	O75012	95 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	CYC1	P00044	109 aa	Predicted RBP	3.82	□□□□□ -1.8
RSC30	YHR056C	ATP23	P53722	227 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	LCL1	Q02786	101 aa		3.82	□□□□□ -1.8
RSC30	YHR056C	COX16	P47081	118 aa		3.81	□□□□□ -1.8
RSC30	YHR056C	TPN1	P53099	579 aa		3.81	□□□□□ -1.8
RSC30	YHR056C	GPI15	P53961	229 aa		3.81	□□□□□ -1.8
RSC30	YHR056C	MRX11	Q03079	207 aa		3.81	□□□□□ -1.8
RSC30	YHR056C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
RSC30	YHR056C	SHH3	Q04487	196 aa		3.81	□□□□□ -1.8
RSC30	YHR056C	RPL33A	P05744	107 aa	Known RBP	3.8	□□□□□ -1.8
RSC30	YHR056C	RPB3	P16370	318 aa	Known RBP	3.8	□□□□□ -1.8
RSC30	YHR056C	RPL33B	P41056	107 aa	Known RBP	3.8	□□□□□ -1.8
RSC30	YHR056C	BRP1	P53194	125 aa		3.8	□□□□□ -1.8
RSC30	YHR056C	MHR1	Q06630	226 aa		3.8	□□□□□ -1.8
RSC30	YHR056C	YDR034C-A	P0C289	58 aa		3.8	□□□□□ -1.8
RSC30	YHR056C	ATG27	P46989	271 aa		3.8	□□□□□ -1.8
RSC30	YHR056C	PEX27	Q08580	376 aa		3.8	□□□□□ -1.8
RSC30	YHR056C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.8	□□□□□ -1.8
RSC30	YHR056C	NHP6B	P11633	99 aa	Known RBP	3.79	□□□□□ -1.8
RSC30	YHR056C	YGL185C	P53100	379 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms