RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C SMM1P53720 384 aaKnown RBP3.03□□□□□ -1.92
PDX1YGR193C YNL234WP53857 426 aa3.03□□□□□ -1.92
PDX1YGR193C CSI2Q08054 341 aa3.03□□□□□ -1.92
PDX1YGR193C YOL131WQ08270 108 aa3.03□□□□□ -1.92
PDX1YGR193C YOR186WQ08560 144 aa3.03□□□□□ -1.92
PDX1YGR193C SLM3Q12093 417 aa3.03□□□□□ -1.92
PDX1YGR193C MED11Q99278 115 aa3.03□□□□□ -1.92
PDX1YGR193C YPL229WQ99395 206 aa3.03□□□□□ -1.92
PDX1YGR193C TY1B-JR2P47100 1755 aaKnown RBP3.02□□□□□ -1.93
PDX1YGR193C TY1B-ER2Q03619 1755 aa3.02□□□□□ -1.93
PDX1YGR193C TY1B-MR1Q04214 1755 aa3.02□□□□□ -1.93
PDX1YGR193C TY1B-MR2Q04670 1755 aaKnown RBP3.02□□□□□ -1.93
PDX1YGR193C TY1B-LR1Q12088 1755 aaKnown RBP3.02□□□□□ -1.93
PDX1YGR193C TY1B-NL1Q12112 1755 aa3.02□□□□□ -1.93
PDX1YGR193C TY1B-GR1Q12141 1755 aa3.02□□□□□ -1.93
PDX1YGR193C TY1B-BLQ12490 1755 aa3.02□□□□□ -1.93
PDX1YGR193C COX4P04037 155 aa3.02□□□□□ -1.93
PDX1YGR193C CKS1P20486 150 aaKnown RBP3.02□□□□□ -1.93
PDX1YGR193C AHT1P29589 182 aa3.02□□□□□ -1.93
PDX1YGR193C HOT13P36078 116 aa3.02□□□□□ -1.93
PDX1YGR193C GPX2P38143 162 aa3.02□□□□□ -1.93
PDX1YGR193C SIM1P40472 476 aa3.02□□□□□ -1.93
PDX1YGR193C PHS1P40857 217 aa3.02□□□□□ -1.93
PDX1YGR193C ATG18P43601 500 aa3.02□□□□□ -1.93
PDX1YGR193C YMR082CQ04276 118 aa3.02□□□□□ -1.93
PDX1YGR193C YPR174CQ06616 221 aaPredicted RBP3.02□□□□□ -1.93
PDX1YGR193C TIM18Q08749 192 aa3.02□□□□□ -1.93
PDX1YGR193C YPL245WQ12179 454 aaKnown RBP3.02□□□□□ -1.93
PDX1YGR193C YIL134C-AQ45U18 67 aa3.02□□□□□ -1.93
PDX1YGR193C UFD4P33202 1483 aa3.02□□□□□ -1.93
PDX1YGR193C HEM4P06174 275 aa3.01□□□□□ -1.93
PDX1YGR193C ADH3P07246 375 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C MRS4P23500 304 aa3.01□□□□□ -1.93
PDX1YGR193C YPT10P38146 199 aa3.01□□□□□ -1.93
PDX1YGR193C SHE1P38200 338 aa3.01□□□□□ -1.93
PDX1YGR193C PHO89P38361 574 aa3.01□□□□□ -1.93
PDX1YGR193C IRC22P40006 225 aa3.01□□□□□ -1.93
PDX1YGR193C SYS1P41544 203 aa3.01□□□□□ -1.93
PDX1YGR193C TES1P41903 349 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C YNL320WP42840 284 aa3.01□□□□□ -1.93
PDX1YGR193C SMD3P43321 101 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C EMC4P53073 190 aa3.01□□□□□ -1.93
PDX1YGR193C CAX4P53223 239 aa3.01□□□□□ -1.93
PDX1YGR193C PCP1P53259 346 aa3.01□□□□□ -1.93
PDX1YGR193C SCW4P53334 386 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C YML053CQ04978 212 aa3.01□□□□□ -1.93
PDX1YGR193C PAU23Q07987 124 aa3.01□□□□□ -1.93
PDX1YGR193C YOR292CQ08743 309 aa3.01□□□□□ -1.93
PDX1YGR193C PAU17Q12370 124 aa3.01□□□□□ -1.93
PDX1YGR193C SUS1Q6WNK7 96 aa3.01□□□□□ -1.93
PDX1YGR193C YHR214C-EQ8TGK0 99 aa3.01□□□□□ -1.93
PDX1YGR193C TY1B-NL2Q99337 1749 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C YRF1-3P0CX14 1859 aa3.01□□□□□ -1.93
PDX1YGR193C YRF1-7P0CX15 1859 aa3.01□□□□□ -1.93
PDX1YGR193C FAS2P19097 1887 aaKnown RBP3.01□□□□□ -1.93
PDX1YGR193C YRF1-6P53819 1859 aa3.01□□□□□ -1.93
PDX1YGR193C BPT1P14772 1559 aa3□□□□□ -1.93
PDX1YGR193C DNA2P38859 1522 aa3□□□□□ -1.93
PDX1YGR193C HSP12P22943 109 aaKnown RBP3□□□□□ -1.93
PDX1YGR193C YCR099CP25657 155 aa3□□□□□ -1.93
PDX1YGR193C PAM17P36147 197 aa3□□□□□ -1.93
PDX1YGR193C CTP1P38152 299 aa3□□□□□ -1.93
PDX1YGR193C GGC1P38988 300 aa3□□□□□ -1.93
PDX1YGR193C YER134CP40081 178 aa3□□□□□ -1.93
PDX1YGR193C SMX2P40204 77 aaKnown RBP3□□□□□ -1.93
PDX1YGR193C CYB5P40312 120 aa3□□□□□ -1.93
PDX1YGR193C GAT4P40569 121 aa3□□□□□ -1.93
PDX1YGR193C SKI6P46948 246 aaPredicted RBP3□□□□□ -1.93
PDX1YGR193C ERV29P53337 310 aa3□□□□□ -1.93
PDX1YGR193C PRM3Q08931 133 aa3□□□□□ -1.93
PDX1YGR193C YNR034W-AQ3E841 98 aa3□□□□□ -1.93
PDX1YGR193C ULS1Q08562 1619 aa3□□□□□ -1.93
PDX1YGR193C SNQ2P32568 1501 aaKnown RBP2.99□□□□□ -1.93
PDX1YGR193C POL1P13382 1468 aa2.99□□□□□ -1.93
PDX1YGR193C SPS100P13130 326 aa2.99□□□□□ -1.93
PDX1YGR193C MIX23P38162 196 aa2.99□□□□□ -1.93
PDX1YGR193C ATX1P38636 73 aa2.99□□□□□ -1.93
PDX1YGR193C YGL193CP53097 103 aa2.99□□□□□ -1.93
PDX1YGR193C YGR018CP53211 109 aa2.99□□□□□ -1.93
PDX1YGR193C YMR252CQ04814 134 aa2.99□□□□□ -1.93
PDX1YGR193C PIN3Q06449 215 aa2.99□□□□□ -1.93
PDX1YGR193C HRT1Q08273 121 aa2.99□□□□□ -1.93
PDX1YGR193C KSH1Q8TGJ3 72 aa2.99□□□□□ -1.93
PDX1YGR193C UTP10P42945 1769 aaKnown RBP2.99□□□□□ -1.93
PDX1YGR193C YMR316C-AI2HB70 103 aa2.98□□□□□ -1.93
PDX1YGR193C LDB16P25587 256 aa2.98□□□□□ -1.93
PDX1YGR193C MIG1P27705 504 aa2.98□□□□□ -1.93
PDX1YGR193C GLC7P32598 312 aaKnown RBP2.98□□□□□ -1.93
PDX1YGR193C UTR5P32630 166 aa2.98□□□□□ -1.93
PDX1YGR193C ATG8P38182 117 aaRIP-Chip data2.98□□□□□ -1.93not detected
PDX1YGR193C TIM17P39515 158 aa2.98□□□□□ -1.93
PDX1YGR193C EMC5P40540 141 aa2.98□□□□□ -1.93
PDX1YGR193C YJL218WP40892 196 aaKnown RBP2.98□□□□□ -1.93
PDX1YGR193C MPC1P53157 130 aaKnown RBP2.98□□□□□ -1.93
PDX1YGR193C SDS23P53172 527 aa2.98□□□□□ -1.93
PDX1YGR193C CYT2Q00873 224 aa2.98□□□□□ -1.93
PDX1YGR193C EST3Q03096 181 aa2.98□□□□□ -1.93
PDX1YGR193C MSA1Q08471 629 aa2.98□□□□□ -1.93
PDX1YGR193C NAT5Q08689 176 aa2.98□□□□□ -1.93
PDX1YGR193C YDL211CQ12121 372 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 117.1 ms