RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W YDR157WA0A023PZE8 133 aa5.34□□□□□ -1.55
NUP49YGL172W YMR316C-AI2HB70 103 aa5.34□□□□□ -1.55
NUP49YGL172W STF1P01098 86 aa5.34□□□□□ -1.55
NUP49YGL172W PIS1P06197 220 aaKnown RBP5.34□□□□□ -1.55
NUP49YGL172W CDC50P25656 391 aa5.34□□□□□ -1.55
NUP49YGL172W SIP1P32578 815 aa5.34□□□□□ -1.55
NUP49YGL172W PRY2P36110 329 aa5.34□□□□□ -1.55
NUP49YGL172W RRT1P38192 103 aa5.34□□□□□ -1.55
NUP49YGL172W VMA7P39111 118 aa5.34□□□□□ -1.55
NUP49YGL172W EMC5P40540 141 aa5.34□□□□□ -1.55
NUP49YGL172W SNX4P47057 423 aa5.34□□□□□ -1.55
NUP49YGL172W TOS8P53147 276 aa5.34□□□□□ -1.55
NUP49YGL172W CTR3Q06686 241 aa5.34□□□□□ -1.55
NUP49YGL172W YOR352WQ08816 343 aa5.34□□□□□ -1.55
NUP49YGL172W YOR015WQ12169 119 aa5.34□□□□□ -1.55
NUP49YGL172W YGR035W-AQ45U48 73 aa5.34□□□□□ -1.55
NUP49YGL172W YBR085C-AO43137 85 aa5.33□□□□□ -1.56
NUP49YGL172W PET494P07390 489 aaPredicted RBP5.33□□□□□ -1.56
NUP49YGL172W YCR022CP25620 114 aa5.33□□□□□ -1.56
NUP49YGL172W FPR2P32472 135 aa5.33□□□□□ -1.56
NUP49YGL172W AVT5P38176 459 aa5.33□□□□□ -1.56
NUP49YGL172W BDH1P39714 382 aa5.33□□□□□ -1.56
NUP49YGL172W AGE2P40529 298 aa5.33□□□□□ -1.56
NUP49YGL172W MIC27P50945 234 aa5.33□□□□□ -1.56
NUP49YGL172W YGR018CP53211 109 aa5.33□□□□□ -1.56
NUP49YGL172W LST7P53237 242 aa5.33□□□□□ -1.56
NUP49YGL172W BOR1P53838 576 aa5.33□□□□□ -1.56
NUP49YGL172W SWT21P53873 357 aaPredicted RBP5.33□□□□□ -1.56
NUP49YGL172W ADD37Q03233 198 aa5.33□□□□□ -1.56
NUP49YGL172W SHH3Q04487 196 aa5.33□□□□□ -1.56
NUP49YGL172W DFR1P07807 211 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
NUP49YGL172W AHT1P29589 182 aa5.32□□□□□ -1.56
NUP49YGL172W ICS2P38284 255 aa5.32□□□□□ -1.56
NUP49YGL172W CSH1P38287 376 aa5.32□□□□□ -1.56
NUP49YGL172W YBR292CP38357 123 aa5.32□□□□□ -1.56
NUP49YGL172W FLO5P38894 1075 aa5.32□□□□□ -1.56
NUP49YGL172W ORM1P53224 222 aa5.32□□□□□ -1.56
NUP49YGL172W YGR219WP53307 113 aa5.32□□□□□ -1.56
NUP49YGL172W CAB4P53332 305 aa5.32□□□□□ -1.56
NUP49YGL172W ODC1Q03028 310 aa5.32□□□□□ -1.56
NUP49YGL172W YMR007WQ03675 126 aa5.32□□□□□ -1.56
NUP49YGL172W MRPL23Q12487 163 aaPredicted RBP5.32□□□□□ -1.56
NUP49YGL172W ZRC1P20107 442 aa5.31□□□□□ -1.56
NUP49YGL172W QCR9P22289 66 aa5.31□□□□□ -1.56
NUP49YGL172W YBL059WP34224 193 aa5.31□□□□□ -1.56
NUP49YGL172W DER1P38307 211 aa5.31□□□□□ -1.56
NUP49YGL172W IMD2P38697 523 aaKnown RBP5.31□□□□□ -1.56
NUP49YGL172W SNU13P39990 126 aaKnown RBP5.31□□□□□ -1.56
NUP49YGL172W RPA43P46669 326 aa5.31□□□□□ -1.56
NUP49YGL172W YCL001W-AP87012 153 aa5.31□□□□□ -1.56
NUP49YGL172W CDC7P06243 507 aa5.31□□□□□ -1.56
NUP49YGL172W SHB17P36136 271 aaKnown RBP5.31□□□□□ -1.56
NUP49YGL172W ATG27P46989 271 aa5.31□□□□□ -1.56
NUP49YGL172W UBC12P52491 188 aa5.31□□□□□ -1.56
NUP49YGL172W AVO2Q04749 426 aa5.31□□□□□ -1.56
NUP49YGL172W YDR215CQ12240 137 aa5.31□□□□□ -1.56
NUP49YGL172W YLR122CQ12312 125 aa5.31□□□□□ -1.56
NUP49YGL172W LAS17Q12446 633 aa5.31□□□□□ -1.56
NUP49YGL172W CYC3P06182 269 aa5.3□□□□□ -1.56
NUP49YGL172W MIC12P38341 106 aa5.3□□□□□ -1.56
NUP49YGL172W SYG1P40528 902 aa5.3□□□□□ -1.56
NUP49YGL172W SNN1P48232 102 aa5.3□□□□□ -1.56
NUP49YGL172W RIB4P50861 169 aaPredicted RBP5.3□□□□□ -1.56
NUP49YGL172W ERV25P54837 211 aaKnown RBP5.3□□□□□ -1.56
NUP49YGL172W SDH7Q04401 133 aa5.3□□□□□ -1.56
NUP49YGL172W PRM3Q08931 133 aa5.3□□□□□ -1.56
NUP49YGL172W ATP14Q12349 124 aa5.3□□□□□ -1.56
NUP49YGL172W COX19Q3E731 98 aa5.3□□□□□ -1.56
NUP49YGL172W POP5P28005 173 aa5.29□□□□□ -1.56
NUP49YGL172W SHG1P38337 142 aa5.29□□□□□ -1.56
NUP49YGL172W SAS2P40963 338 aa5.29□□□□□ -1.56
NUP49YGL172W FMP41P53889 259 aaKnown RBP5.29□□□□□ -1.56
NUP49YGL172W EOS1P53938 366 aa5.29□□□□□ -1.56
NUP49YGL172W TMA23Q03525 211 aa5.29□□□□□ -1.56
NUP49YGL172W TIM18Q08749 192 aa5.29□□□□□ -1.56
NUP49YGL172W YHR213WP0CI67 198 aa5.28□□□□□ -1.56
NUP49YGL172W YHR212W-AP0CX91 67 aa5.28□□□□□ -1.56
NUP49YGL172W SFT2P38166 215 aa5.28□□□□□ -1.56
NUP49YGL172W SPC25P40014 221 aa5.28□□□□□ -1.56
NUP49YGL172W YNL194CP40169 301 aa5.28□□□□□ -1.56
NUP49YGL172W POR2P40478 281 aa5.28□□□□□ -1.56
NUP49YGL172W RTS2P40962 232 aa5.28□□□□□ -1.56
NUP49YGL172W HST4P53688 370 aa5.28□□□□□ -1.56
NUP49YGL172W CAF40P53829 373 aa5.28□□□□□ -1.56
NUP49YGL172W ATC1Q04005 294 aa5.28□□□□□ -1.56
NUP49YGL172W SME1Q12330 94 aaPredicted RBP5.28□□□□□ -1.56
NUP49YGL172W DYN1P36022 4092 aa5.27□□□□□ -1.57
NUP49YGL172W CYC7P00045 113 aa5.27□□□□□ -1.57
NUP49YGL172W TDH1P00360 332 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W MRP2P10663 115 aaPredicted RBP5.27□□□□□ -1.57
NUP49YGL172W RPS2P25443 254 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W MSK1P32048 576 aa5.27□□□□□ -1.57
NUP49YGL172W ALK2P32789 676 aaPredicted RBP5.27□□□□□ -1.57
NUP49YGL172W RPL14AP36105 138 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W LSM2P38203 95 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W RPL14BP38754 138 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W PET100P38958 111 aa5.27□□□□□ -1.57
NUP49YGL172W SMD3P43321 101 aaKnown RBP5.27□□□□□ -1.57
NUP49YGL172W YPI1P43587 155 aa5.27□□□□□ -1.57
NUP49YGL172W YJL027CP47063 138 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms