RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C YMR099CQ03161 297 aaKnown RBP1.66□□□□□ -2.14
RRI1YDL216C PRP11Q07350 266 aaPredicted RBP1.66□□□□□ -2.14
RRI1YDL216C IRA2P19158 3079 aa1.66□□□□□ -2.14
RRI1YDL216C ECM29P38737 1868 aa1.66□□□□□ -2.14
RRI1YDL216C NOP19P53317 196 aaPredicted RBP1.66□□□□□ -2.14
RRI1YDL216C SHH3Q04487 196 aa1.66□□□□□ -2.14
RRI1YDL216C ADF1Q2V2Q1 113 aa1.66□□□□□ -2.14
RRI1YDL216C FMP27Q06179 2628 aa1.65□□□□□ -2.14
RRI1YDL216C PRP8P33334 2413 aaKnown RBP1.65□□□□□ -2.14
RRI1YDL216C SNF4P12904 322 aa1.65□□□□□ -2.15
RRI1YDL216C PHO85P17157 305 aa1.65□□□□□ -2.15
RRI1YDL216C HPA3P39979 161 aa1.65□□□□□ -2.15
RRI1YDL216C YNL184CP53876 108 aa1.65□□□□□ -2.15
RRI1YDL216C YMR315WQ04869 349 aaKnown RBP1.65□□□□□ -2.15
RRI1YDL216C YOL014WQ08110 124 aa1.65□□□□□ -2.15
RRI1YDL216C ACC1Q00955 2233 aaKnown RBP1.64□□□□□ -2.15
RRI1YDL216C SEN1Q00416 2231 aaKnown RBP1.64□□□□□ -2.15
RRI1YDL216C RPL40AP0CH08 128 aaKnown RBP1.64□□□□□ -2.15
RRI1YDL216C RPL40BP0CH09 128 aaKnown RBP1.64□□□□□ -2.15
RRI1YDL216C YHL018WP38744 120 aaPredicted RBP1.64□□□□□ -2.15
RRI1YDL216C TMA22P47089 198 aaPredicted RBP1.64□□□□□ -2.15
RRI1YDL216C TDA4P47153 279 aa1.64□□□□□ -2.15
RRI1YDL216C RTC4P53850 401 aa1.64□□□□□ -2.15
RRI1YDL216C YML100W-AQ8TGT0 57 aa1.64□□□□□ -2.15
RRI1YDL216C IGO2Q9P305 131 aa1.64□□□□□ -2.15
RRI1YDL216C COX8P04039 78 aa1.63□□□□□ -2.15
RRI1YDL216C PDS1P40316 373 aaPredicted RBP1.63□□□□□ -2.15
RRI1YDL216C YJR111CP47148 283 aaKnown RBP1.63□□□□□ -2.15
RRI1YDL216C YMR252CQ04814 134 aa1.63□□□□□ -2.15
RRI1YDL216C YPR013CQ12145 317 aa1.63□□□□□ -2.15
RRI1YDL216C MGT1P26188 188 aa1.62□□□□□ -2.15
RRI1YDL216C SFK1P35735 353 aa1.62□□□□□ -2.15
RRI1YDL216C RNH202Q05635 350 aa1.62□□□□□ -2.15
RRI1YDL216C ADE6P38972 1358 aaKnown RBP1.62□□□□□ -2.15
RRI1YDL216C YHR212W-AP0CX91 67 aa1.61□□□□□ -2.15
RRI1YDL216C RPB7P34087 171 aa1.61□□□□□ -2.15
RRI1YDL216C CUP9P41817 306 aa1.61□□□□□ -2.15
RRI1YDL216C RPL37AP49166 88 aaKnown RBP1.61□□□□□ -2.15
RRI1YDL216C ARO80Q04052 950 aa1.61□□□□□ -2.15
RRI1YDL216C NAT3Q06504 195 aa1.61□□□□□ -2.15
RRI1YDL216C RPO41P13433 1351 aaKnown RBP1.61□□□□□ -2.15
RRI1YDL216C TIR1P10863 254 aa1.6□□□□□ -2.15
RRI1YDL216C NSP1P14907 823 aaKnown RBP1.6□□□□□ -2.15
RRI1YDL216C ARO7P32178 256 aa1.6□□□□□ -2.15
RRI1YDL216C PAM17P36147 197 aa1.6□□□□□ -2.15
RRI1YDL216C FMP23P38231 175 aa1.6□□□□□ -2.15
RRI1YDL216C THG1P53215 237 aaKnown RBP1.6□□□□□ -2.15
RRI1YDL216C YNL033WP53964 284 aa1.6□□□□□ -2.15
RRI1YDL216C YDL085C-AQ3E7B7 68 aaKnown RBP1.6□□□□□ -2.15
RRI1YDL216C VPS71Q03433 280 aa1.59□□□□□ -2.16
RRI1YDL216C UPS3Q04006 179 aa1.59□□□□□ -2.16
RRI1YDL216C YMR253CQ04835 414 aa1.59□□□□□ -2.16
RRI1YDL216C YOL024WQ08172 172 aa1.59□□□□□ -2.16
RRI1YDL216C FIT2Q08906 153 aa1.59□□□□□ -2.16
RRI1YDL216C RPS24AP0CX31 135 aaKnown RBP1.58□□□□□ -2.16
RRI1YDL216C RPS24BP0CX32 135 aaKnown RBP1.58□□□□□ -2.16
RRI1YDL216C ALB1P47019 175 aaPredicted RBP1.58□□□□□ -2.16
RRI1YDL216C MOT1P32333 1867 aa1.58□□□□□ -2.16
RRI1YDL216C IDP1P21954 428 aaKnown RBP1.57□□□□□ -2.16
RRI1YDL216C GSP2P32836 220 aaKnown RBP1.57□□□□□ -2.16
RRI1YDL216C YEL008WP40001 126 aa1.57□□□□□ -2.16
RRI1YDL216C SPC25P40014 221 aa1.57□□□□□ -2.16
RRI1YDL216C LYS2P07702 1392 aa1.56□□□□□ -2.16
RRI1YDL216C YCL042WP25572 119 aa1.56□□□□□ -2.16
RRI1YDL216C CAF4P36130 643 aa1.56□□□□□ -2.16
RRI1YDL216C HUA1P40325 198 aa1.56□□□□□ -2.16
RRI1YDL216C YFL019CP43576 117 aa1.56□□□□□ -2.16
RRI1YDL216C YPR014CQ6B0W2 109 aa1.56□□□□□ -2.16
RRI1YDL216C MYO1P08964 1928 aa1.56□□□□□ -2.16
RRI1YDL216C MLP1Q02455 1875 aaKnown RBP1.55□□□□□ -2.16
RRI1YDL216C NSG1P38837 291 aa1.55□□□□□ -2.16
RRI1YDL216C YLR412C-AQ3E742 68 aa1.55□□□□□ -2.16
RRI1YDL216C TAH1P25638 111 aaPredicted RBP1.54□□□□□ -2.16
RRI1YDL216C NOC4Q06512 552 aaPredicted RBP1.54□□□□□ -2.16
RRI1YDL216C COA3Q3E7B2 85 aa1.54□□□□□ -2.16
RRI1YDL216C FAS1P07149 2051 aaKnown RBP1.53□□□□□ -2.16
RRI1YDL216C ADE1P27616 306 aa1.53□□□□□ -2.16
RRI1YDL216C PGA1P53896 198 aa1.53□□□□□ -2.16
RRI1YDL216C YOR342CQ12182 319 aa1.53□□□□□ -2.16
RRI1YDL216C CSF1Q12150 2958 aa1.53□□□□□ -2.17
RRI1YDL216C YCR023CP25351 611 aa1.52□□□□□ -2.17
RRI1YDL216C TRX3P25372 127 aa1.52□□□□□ -2.17
RRI1YDL216C NRK1P53915 240 aa1.52□□□□□ -2.17
RRI1YDL216C YLR460CP54007 376 aa1.52□□□□□ -2.17
RRI1YDL216C DUR1,2P32528 1835 aaKnown RBP1.51□□□□□ -2.17
RRI1YDL216C SHG1P38337 142 aa1.51□□□□□ -2.17
RRI1YDL216C GPI14P47088 403 aaKnown RBP1.51□□□□□ -2.17
RRI1YDL216C DIG2Q03373 323 aaKnown RBP1.51□□□□□ -2.17
RRI1YDL216C AIM34Q03673 198 aa1.51□□□□□ -2.17
RRI1YDL216C YOR015WQ12169 119 aa1.51□□□□□ -2.17
RRI1YDL216C TRA1P38811 3744 aa1.51□□□□□ -2.17
RRI1YDL216C NSA2P40078 261 aaKnown RBP1.5□□□□□ -2.17
RRI1YDL216C FMP32P43557 207 aa1.5□□□□□ -2.17
RRI1YDL216C RRP17Q04031 235 aaPredicted RBP1.5□□□□□ -2.17
RRI1YDL216C YDR391CQ04170 232 aa1.5□□□□□ -2.17
RRI1YDL216C MPD1Q12404 318 aaKnown RBP1.5□□□□□ -2.17
RRI1YDL216C LAA1P39526 2014 aa1.5□□□□□ -2.17
RRI1YDL216C STP22P25604 385 aa1.49□□□□□ -2.17
RRI1YDL216C GRX5Q02784 150 aa1.49□□□□□ -2.17
RRI1YDL216C PIR1Q03178 341 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms