RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W YMR254CQ04838 102 aa6.08□□□□□ -1.44
TOD6YBL054W HRD1Q08109 551 aa6.08□□□□□ -1.44
TOD6YBL054W YDL180WQ12301 547 aa6.08□□□□□ -1.44
TOD6YBL054W YLR302CO13544 120 aa6.07□□□□□ -1.44
TOD6YBL054W MCH2P36032 473 aa6.07□□□□□ -1.44
TOD6YBL054W YER079WP40052 210 aaKnown RBP6.07□□□□□ -1.44
TOD6YBL054W YNL198CP40166 100 aa6.07□□□□□ -1.44
TOD6YBL054W TIF34P40217 347 aaKnown RBP6.07□□□□□ -1.44
TOD6YBL054W YDL183CP48569 320 aa6.07□□□□□ -1.44
TOD6YBL054W MIC27P50945 234 aa6.07□□□□□ -1.44
TOD6YBL054W LCL3P53153 274 aa6.07□□□□□ -1.44
TOD6YBL054W CAB4P53332 305 aa6.07□□□□□ -1.44
TOD6YBL054W DYN2Q02647 92 aa6.07□□□□□ -1.44
TOD6YBL054W MPD1Q12404 318 aaKnown RBP6.07□□□□□ -1.44
TOD6YBL054W BOL1Q3E793 110 aa6.07□□□□□ -1.44
TOD6YBL054W COX1P00401 534 aa6.06□□□□□ -1.44
TOD6YBL054W RPP2BP02400 110 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W RPS14AP06367 137 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W SAG1P20840 650 aa6.06□□□□□ -1.44
TOD6YBL054W SRX1P36077 127 aa6.06□□□□□ -1.44
TOD6YBL054W PSD1P39006 500 aa6.06□□□□□ -1.44
TOD6YBL054W RPS14BP39516 138 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W YML079WQ03629 201 aa6.06□□□□□ -1.44
TOD6YBL054W ECM18Q04623 453 aa6.06□□□□□ -1.44
TOD6YBL054W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
TOD6YBL054W YPS3Q12303 508 aa6.06□□□□□ -1.44
TOD6YBL054W FEN2P25621 512 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W IMP1P28627 190 aa6.06□□□□□ -1.44
TOD6YBL054W RAD23P32628 398 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W YPT53P36019 220 aa6.06□□□□□ -1.44
TOD6YBL054W YNL200CP40165 246 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W SDS23P53172 527 aa6.06□□□□□ -1.44
TOD6YBL054W COX18P53239 316 aa6.06□□□□□ -1.44
TOD6YBL054W THI72Q08579 599 aa6.06□□□□□ -1.44
TOD6YBL054W FSF1Q12029 327 aaKnown RBP6.06□□□□□ -1.44
TOD6YBL054W PIN2Q12057 282 aa6.06□□□□□ -1.44
TOD6YBL054W RPP2AP05319 106 aaKnown RBP6.05□□□□□ -1.44
TOD6YBL054W DAL82P21705 255 aa6.05□□□□□ -1.44
TOD6YBL054W NNK1P36003 928 aa6.05□□□□□ -1.44
TOD6YBL054W YBR220CP38318 560 aa6.05□□□□□ -1.44
TOD6YBL054W PFS1P38872 237 aa6.05□□□□□ -1.44
TOD6YBL054W YIL029CP40538 142 aa6.05□□□□□ -1.44
TOD6YBL054W SAS2P40963 338 aa6.05□□□□□ -1.44
TOD6YBL054W YFL054CP43549 646 aa6.05□□□□□ -1.44
TOD6YBL054W CIS3P47001 227 aa6.05□□□□□ -1.44
TOD6YBL054W BRP1P53194 125 aa6.05□□□□□ -1.44
TOD6YBL054W YNR071CP53757 342 aa6.05□□□□□ -1.44
TOD6YBL054W ARC18Q05933 178 aaKnown RBP6.05□□□□□ -1.44
TOD6YBL054W NCE102Q12207 173 aaRIP-Chip data6.05□□□□□ -1.44not detected
TOD6YBL054W YMR316C-AI2HB70 103 aa6.04□□□□□ -1.44
TOD6YBL054W YKR073CP36153 106 aa6.04□□□□□ -1.44
TOD6YBL054W YHR138CP38841 114 aaPredicted RBP6.04□□□□□ -1.44
TOD6YBL054W YIL086CP40503 102 aa6.04□□□□□ -1.44
TOD6YBL054W PCP1P53259 346 aa6.04□□□□□ -1.44
TOD6YBL054W ATP19P81451 68 aa6.04□□□□□ -1.44
TOD6YBL054W SCW10Q04951 389 aa6.04□□□□□ -1.44
TOD6YBL054W DPP1Q05521 289 aa6.04□□□□□ -1.44
TOD6YBL054W GRE1Q08969 168 aa6.04□□□□□ -1.44
TOD6YBL054W RPL7BQ12213 244 aaKnown RBP6.04□□□□□ -1.44
TOD6YBL054W CDC39P25655 2108 aaKnown RBP6.04□□□□□ -1.44
TOD6YBL054W CYC7P00045 113 aa6.03□□□□□ -1.44
TOD6YBL054W MRS1P07266 363 aa6.03□□□□□ -1.44
TOD6YBL054W RPS16AP0CX51 143 aaKnown RBP6.03□□□□□ -1.44
TOD6YBL054W RPS16BP0CX52 143 aaKnown RBP6.03□□□□□ -1.44
TOD6YBL054W YFL068WP0CX99 160 aa6.03□□□□□ -1.44
TOD6YBL054W YLL066W-AP0CY00 160 aa6.03□□□□□ -1.44
TOD6YBL054W YLL067W-AP0CY01 160 aa6.03□□□□□ -1.44
TOD6YBL054W MRS3P10566 314 aa6.03□□□□□ -1.44
TOD6YBL054W ROX3P25046 220 aa6.03□□□□□ -1.44
TOD6YBL054W ECM33P38248 429 aaKnown RBP6.03□□□□□ -1.44
TOD6YBL054W POP3P53833 195 aaPredicted RBP6.03□□□□□ -1.44
TOD6YBL054W ATG4P53867 494 aa6.03□□□□□ -1.44
TOD6YBL054W SWT21P53873 357 aaPredicted RBP6.03□□□□□ -1.44
TOD6YBL054W HPF1Q05164 967 aa6.03□□□□□ -1.44
TOD6YBL054W YPR098CQ06089 161 aa6.03□□□□□ -1.44
TOD6YBL054W WIP1Q2V2P8 89 aa6.03□□□□□ -1.44
TOD6YBL054W ADH1P00330 348 aaKnown RBP6.02□□□□□ -1.45
TOD6YBL054W RPL23AP0CX41 137 aaKnown RBP6.02□□□□□ -1.45
TOD6YBL054W RPL23BP0CX42 137 aaKnown RBP6.02□□□□□ -1.45
TOD6YBL054W TIR1P10863 254 aa6.02□□□□□ -1.45
TOD6YBL054W YPS6P40583 537 aa6.02□□□□□ -1.45
TOD6YBL054W UBC13P52490 153 aa6.02□□□□□ -1.45
TOD6YBL054W SWS2P53937 143 aa6.02□□□□□ -1.45
TOD6YBL054W VPS71Q03433 280 aa6.02□□□□□ -1.45
TOD6YBL054W BET5Q03630 159 aa6.02□□□□□ -1.45
TOD6YBL054W YHP1Q04116 353 aa6.02□□□□□ -1.45
TOD6YBL054W UPS1Q05776 175 aa6.02□□□□□ -1.45
TOD6YBL054W POS5Q06892 414 aa6.02□□□□□ -1.45
TOD6YBL054W ISU2Q12056 156 aa6.02□□□□□ -1.45
TOD6YBL054W YIL102C-AQ2V2P5 75 aa6.02□□□□□ -1.45
TOD6YBL054W RPL12AP0CX53 165 aaKnown RBP6.01□□□□□ -1.45
TOD6YBL054W RPL12BP0CX54 165 aa6.01□□□□□ -1.45
TOD6YBL054W ATP10P18496 279 aa6.01□□□□□ -1.45
TOD6YBL054W YHR173CP38864 112 aa6.01□□□□□ -1.45
TOD6YBL054W REE1P40893 198 aa6.01□□□□□ -1.45
TOD6YBL054W RAV2Q03956 351 aa6.01□□□□□ -1.45
TOD6YBL054W YGL258W-AQ3E740 77 aa6.01□□□□□ -1.45
TOD6YBL054W HSP12P22943 109 aaKnown RBP6.01□□□□□ -1.45
TOD6YBL054W TOM40P23644 387 aaKnown RBP6.01□□□□□ -1.45
TOD6YBL054W PRS4P38063 326 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 97.9 ms