RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W DER1P38307 211 aa2.79□□□□□ -1.96
NUP60YAR002W ECM14P38836 430 aa2.79□□□□□ -1.96
NUP60YAR002W LOC1P43586 204 aaPredicted RBP2.79□□□□□ -1.96
NUP60YAR002W YJR015WP47090 510 aa2.79□□□□□ -1.96
NUP60YAR002W MIC27P50945 234 aa2.79□□□□□ -1.96
NUP60YAR002W CRH1P53301 507 aa2.79□□□□□ -1.96
NUP60YAR002W FYV6P53913 173 aa2.79□□□□□ -1.96
NUP60YAR002W YML122CQ03207 126 aa2.79□□□□□ -1.96
NUP60YAR002W RAX2Q12465 1220 aa2.79□□□□□ -1.96
NUP60YAR002W PET494P07390 489 aaPredicted RBP2.78□□□□□ -1.96
NUP60YAR002W RPS22AP0C0W1 130 aaKnown RBP2.78□□□□□ -1.96
NUP60YAR002W NOP1P15646 327 aaKnown RBP2.78□□□□□ -1.96
NUP60YAR002W COQ3P27680 312 aa2.78□□□□□ -1.96
NUP60YAR002W RPS0AP32905 252 aaKnown RBP2.78□□□□□ -1.96
NUP60YAR002W YGP1P38616 354 aaKnown RBP2.78□□□□□ -1.96
NUP60YAR002W CTR2P38865 189 aa2.78□□□□□ -1.96
NUP60YAR002W HSP10P38910 106 aa2.78□□□□□ -1.96
NUP60YAR002W NOP16P40007 231 aaKnown RBP2.78□□□□□ -1.96
NUP60YAR002W YER121WP40076 114 aa2.78□□□□□ -1.96
NUP60YAR002W SGN1P40561 250 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
NUP60YAR002W YGL114WP53134 725 aa2.78□□□□□ -1.96
NUP60YAR002W SSU72P53538 206 aaPredicted RBP2.78□□□□□ -1.96
NUP60YAR002W ATC1Q04005 294 aa2.78□□□□□ -1.96
NUP60YAR002W SHH3Q04487 196 aa2.78□□□□□ -1.96
NUP60YAR002W YOP1Q12402 180 aa2.78□□□□□ -1.96
NUP60YAR002W CMC2Q3E7A4 109 aa2.78□□□□□ -1.96
NUP60YAR002W YMR316C-AI2HB70 103 aa2.77□□□□□ -1.97
NUP60YAR002W HTB1P02293 131 aaKnown RBP2.77□□□□□ -1.97
NUP60YAR002W PAU19P0CE85 124 aa2.77□□□□□ -1.97
NUP60YAR002W PAU21P0CE86 164 aa2.77□□□□□ -1.97
NUP60YAR002W PAU22P0CE87 164 aa2.77□□□□□ -1.97
NUP60YAR002W NHP6AP11632 93 aaKnown RBP2.77□□□□□ -1.97
NUP60YAR002W TOM40P23644 387 aaKnown RBP2.77□□□□□ -1.97
NUP60YAR002W PAU3P25610 124 aa2.77□□□□□ -1.97
NUP60YAR002W FPR2P32472 135 aa2.77□□□□□ -1.97
NUP60YAR002W YNK1P36010 153 aaKnown RBP2.77□□□□□ -1.97
NUP60YAR002W PAU5P43575 122 aa2.77□□□□□ -1.97
NUP60YAR002W ATG27P46989 271 aa2.77□□□□□ -1.97
NUP60YAR002W DSK2P48510 373 aa2.77□□□□□ -1.97
NUP60YAR002W LST7P53237 242 aa2.77□□□□□ -1.97
NUP60YAR002W DAD3P69850 94 aa2.77□□□□□ -1.97
NUP60YAR002W ARL3Q02804 198 aa2.77□□□□□ -1.97
NUP60YAR002W YHP1Q04116 353 aa2.77□□□□□ -1.97
NUP60YAR002W LOA1Q06508 300 aa2.77□□□□□ -1.97
NUP60YAR002W POS5Q06892 414 aa2.77□□□□□ -1.97
NUP60YAR002W TRA1P38811 3744 aa2.77□□□□□ -1.97
NUP60YAR002W FMP49A0A023PZB3 126 aa2.76□□□□□ -1.97
NUP60YAR002W YBR056W-AI2HB52 66 aa2.76□□□□□ -1.97
NUP60YAR002W BGL2P15703 313 aaKnown RBP2.76□□□□□ -1.97
NUP60YAR002W RNA15P25299 296 aaPredicted RBP2.76□□□□□ -1.97
NUP60YAR002W HMX1P32339 317 aa2.76□□□□□ -1.97
NUP60YAR002W TCA17P32613 152 aa2.76□□□□□ -1.97
NUP60YAR002W PMU1P36069 295 aa2.76□□□□□ -1.97
NUP60YAR002W ADH5P38113 351 aaKnown RBP2.76□□□□□ -1.97
NUP60YAR002W SUR2P38992 349 aa2.76□□□□□ -1.97
NUP60YAR002W YAR068WP39564 161 aa2.76□□□□□ -1.97
NUP60YAR002W CYB5P40312 120 aa2.76□□□□□ -1.97
NUP60YAR002W SAS2P40963 338 aa2.76□□□□□ -1.97
NUP60YAR002W GPI2P46961 280 aa2.76□□□□□ -1.97
NUP60YAR002W HIT1P46973 164 aa2.76□□□□□ -1.97
NUP60YAR002W YGL185CP53100 379 aa2.76□□□□□ -1.97
NUP60YAR002W CGR1P53188 120 aa2.76□□□□□ -1.97
NUP60YAR002W YNR064CP53750 290 aa2.76□□□□□ -1.97
NUP60YAR002W APS2Q00381 147 aa2.76□□□□□ -1.97
NUP60YAR002W SNA4Q07549 140 aa2.76□□□□□ -1.97
NUP60YAR002W LDS2Q08218 356 aa2.76□□□□□ -1.97
NUP60YAR002W YDL009CQ12210 107 aa2.76□□□□□ -1.97
NUP60YAR002W YCL048W-AQ2V2Q2 79 aa2.76□□□□□ -1.97
NUP60YAR002W PIS1P06197 220 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W SPS100P13130 326 aa2.75□□□□□ -1.97
NUP60YAR002W MDM10P18409 493 aa2.75□□□□□ -1.97
NUP60YAR002W RPS2P25443 254 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W IES6P32617 166 aa2.75□□□□□ -1.97
NUP60YAR002W RAD23P32628 398 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W MTR2P34232 184 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W SSS1P35179 80 aa2.75□□□□□ -1.97
NUP60YAR002W GPI18P38211 433 aa2.75□□□□□ -1.97
NUP60YAR002W LSM8P47093 109 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W MIX17Q03667 156 aa2.75□□□□□ -1.97
NUP60YAR002W NAT3Q06504 195 aa2.75□□□□□ -1.97
NUP60YAR002W PML1Q07930 204 aaPredicted RBP2.75□□□□□ -1.97
NUP60YAR002W IRC25Q07951 179 aa2.75□□□□□ -1.97
NUP60YAR002W YPR063CQ12160 140 aa2.75□□□□□ -1.97
NUP60YAR002W CRC1Q12289 327 aa2.75□□□□□ -1.97
NUP60YAR002W PAA1Q12447 191 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W SOD1P00445 154 aaKnown RBP2.75□□□□□ -1.97
NUP60YAR002W DFR1P07807 211 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
NUP60YAR002W YGL010WP25338 174 aa2.75□□□□□ -1.97
NUP60YAR002W YKL187CP34231 750 aa2.75□□□□□ -1.97
NUP60YAR002W MRPL28P36527 147 aa2.75□□□□□ -1.97
NUP60YAR002W AVT5P38176 459 aa2.75□□□□□ -1.97
NUP60YAR002W YBL071CP38185 102 aa2.75□□□□□ -1.97
NUP60YAR002W CSH1P38287 376 aa2.75□□□□□ -1.97
NUP60YAR002W BDH1P39714 382 aa2.75□□□□□ -1.97
NUP60YAR002W YIL163CP40448 117 aa2.75□□□□□ -1.97
NUP60YAR002W LST8P41318 303 aa2.75□□□□□ -1.97
NUP60YAR002W CYT2Q00873 224 aa2.75□□□□□ -1.97
NUP60YAR002W STD1Q02794 444 aa2.75□□□□□ -1.97
NUP60YAR002W ARR2Q06597 130 aa2.75□□□□□ -1.97
NUP60YAR002W MCH1Q07376 486 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms