RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LAMTOR5O43504 91 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 NARSO43776 548 aaKnown RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 TNNC2P02585 160 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 EPCAMP16422 314 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 KLK7P49862 253 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 AP3M2P53677 418 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 CETN1Q12798 172 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 COL9A2Q14055 689 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ACAP1Q15027 740 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 SYCP1Q15431 976 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 XKR4Q5GH76 650 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 TDRD10Q5VZ19 366 aaKnown RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 KRT39Q6A163 491 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 NT5DC4Q86YG4 428 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 SLC39A11Q8N1S5 342 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ZNF516Q92618 1163 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ANP32BQ92688 251 aaKnown RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 PCMTD1Q96MG8 357 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ZMAT2Q96NC0 199 aaKnown RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 CASD1Q96PB1 797 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 GAD1Q99259 594 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 CRACR2AQ9BSW2 395 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 ARHGEF3Q9NR81 526 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 RNF19AQ9NV58 838 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 SPATA6Q9NWH7 488 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-228ENST00000641847 TUBGCP4Q9UGJ1 667 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 GMEB2Q9UKD1 530 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 INPP5FQ9Y2H2 1132 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 DERAQ9Y315 318 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 IRAK3Q9Y616 596 aa10.1□□□□□ -0.79
PHGDH-228ENST00000641847 TRIP11Q15643 1979 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 SMIM28A0A1B0GU29 152 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 GTPBP10A4D1E9 387 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ARL5CA6NH57 179 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 PTGESO14684 152 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 PMM2O15305 246 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 XPOTO43592 962 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 PHACTR2O75167 634 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 OFD1O75665 1012 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CLSTN1O94985 981 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 C4BPAP04003 597 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CTSAP10619 480 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 KCNE1P15382 129 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 KLRC2P26717 231 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CDC25BP30305 580 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 PBX1P40424 430 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 SCNN1GP51170 649 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 GUCY2FP51841 1108 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 EXOC3L4Q17RC7 722 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ZACNQ401N2 412 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CLLU1OSQ5K130 101 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 GLB1LQ6UWU2 654 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CYP26C1Q6V0L0 522 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 TRAPPC11Q7Z392 1133 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 VSTM4Q8IW00 320 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 SLC44A3Q8N4M1 653 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 URGCPQ8TCY9 931 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 HELQQ8TDG4 1101 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 SLC22A17Q8WUG5 538 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 CACTINQ8WUQ7 758 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 TSPAN18Q96SJ8 248 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 LSM14BQ9BX40 385 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ITGA11Q9UKX5 1188 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 RAB23Q9ULC3 237 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 UBQLN1Q9UMX0 589 aaKnown RBP10.09□□□□□ -0.79
PHGDH-228ENST00000641847 SIK3Q9Y2K2 1263 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
PHGDH-228ENST00000641847 ITIH6Q6UXX5 1313 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 CEP295Q9C0D2 2601 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 TDRD15B5MCY1 1934 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 INPPL1O15357 1258 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 TBC1D4O60343 1298 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 VNN1O95497 513 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 POMCP01189 267 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 HLA-DRAP01903 254 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 ITGB3P05106 788 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 KRT19P08727 400 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 POLR2BP30876 1174 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 MAGEA9P43362 315 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
PHGDH-228ENST00000641847 BCAR1P56945 870 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 KCNMA1Q12791 1236 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 GRIK3Q13003 919 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 NCOA4Q13772 614 aa10.08□□□□□ -0.8
PHGDH-228ENST00000641847 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms