RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 CETN3O15182 167 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 PAPLNO95428 1278 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 HLA-DRAP01903 254 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
CLN6-225ENST00000638144 FSHRP23945 695 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 LMO2P25791 158 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 PIK3CAP42336 1068 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 GPR15P49685 360 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 TNNC1P63316 161 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 CLDN10P78369 228 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 TSPY1Q01534 308 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 ZACNQ401N2 412 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 PABPC1LQ4VXU2 614 aaKnown RBP13.42□□□□□ -0.26
CLN6-225ENST00000638144 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
CLN6-225ENST00000638144 INTS8Q75QN2 995 aaKnown RBP13.42□□□□□ -0.26
CLN6-225ENST00000638144 GPT2Q8TD30 523 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 TCEAL4Q96EI5 215 aa13.42□□□□□ -0.26
CLN6-225ENST00000638144 DUSP9Q99956 384 aaKnown RBP13.42□□□□□ -0.26
CLN6-225ENST00000638144 TECTAO75443 2155 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 PTPRDP23468 1912 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 MAPK13O15264 365 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 RHOP08100 348 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 GJA1P17302 382 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 CEBPBP17676 345 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 CDH8P55286 799 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 MYL7Q01449 175 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 LRRC63Q05C16 580 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 ORC1Q13415 861 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 MGAT5BQ3V5L5 792 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 INTS6LQ5JSJ4 861 aaKnown RBP13.41□□□□□ -0.26
CLN6-225ENST00000638144 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
CLN6-225ENST00000638144 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 RSAD2Q8WXG1 361 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 SYAP1Q96A49 352 aaPredicted RBP13.41□□□□□ -0.26
CLN6-225ENST00000638144 DHTKD1Q96HY7 919 aaPredicted RBP13.41□□□□□ -0.26
CLN6-225ENST00000638144 SYT15Q9BQS2 421 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 NUP62CLQ9H1M0 184 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 DNAJC25Q9H1X3 360 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 CRTAC1Q9NQ79 661 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 GTF3C4Q9UKN8 822 aa13.41□□□□□ -0.26
CLN6-225ENST00000638144 MYBPHLA2RUH7 354 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 GABRDO14764 452 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 DCXO43602 365 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 MYL4P12829 197 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 ATF6P18850 670 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 WARSP23381 471 aaKnown RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 CCR2P41597 374 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 AP3M2P53677 418 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 FKBP3Q00688 224 aaKnown RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 PAK1Q13153 545 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 POTEHQ6S545 545 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 CYP26C1Q6V0L0 522 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 DCP1BQ8IZD4 617 aaKnown RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 PKMYT1Q99640 499 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 APOBEC3GQ9HC16 384 aaKnown RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 HMGXB4Q9UGU5 601 aa13.4□□□□□ -0.26
CLN6-225ENST00000638144 MRPS23Q9Y3D9 190 aaKnown RBP13.4□□□□□ -0.26
CLN6-225ENST00000638144 IKBKBO14920 756 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
CLN6-225ENST00000638144 POU2F2P09086 479 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 CYP2F1P24903 491 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 PCSK1P29120 753 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ATICP31939 592 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ALDH1A3P47895 512 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 LHX1P48742 406 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 MXI1P50539 228 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 PTPN21Q16825 1174 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 CCDC40Q4G0X9 1142 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 NPAS3Q8IXF0 933 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ZDHHC14Q8IZN3 488 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 FAM200AQ8TCP9 573 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 SEMA4DQ92854 862 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 FGF13Q92913 245 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 MYLPFQ96A32 169 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 MKNK1Q9BUB5 465 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 GTPBP4Q9BZE4 634 aaKnown RBP13.39□□□□□ -0.27
CLN6-225ENST00000638144 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
CLN6-225ENST00000638144 USTQ9Y2C2 406 aa13.39□□□□□ -0.27
CLN6-225ENST00000638144 PCDHB5Q9Y5E4 795 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms