RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 NUP107P57740 925 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 KCNC4Q03721 635 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 KNOP1Q1ED39 458 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 OGFRL1Q5TC84 451 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 ANO5Q75V66 913 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 TMEM126BQ8IUX1 230 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 CYTH2Q99418 400 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 TSSK1BQ9BXA7 367 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 FBXO6Q9NRD1 293 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 NFASCO94856 1347 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 LAMB2P55268 1798 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 A0A088AWK7 358 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TCRBV7S2A1N4TA0A589 114 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 FUOMA2VDF0 154 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 POTECB2RU33 542 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 LSM1O15116 133 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 CYTH3O43739 400 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 BAIAP3O94812 1187 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 ABCB4P21439 1286 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 STIP1P31948 543 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 BCAMP50895 628 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 VCPP55072 806 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 NAA20P61599 178 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TGFBIQ15582 683 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 CCDC142Q17RM4 750 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 HERC4Q5GLZ8 1057 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 EFHC1Q5JVL4 640 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 POTEHQ6S545 545 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 KCNK18Q7Z418 384 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 NLRX1Q86UT6 975 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 ZCCHC9Q8N567 271 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 SLC35C1Q96A29 364 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 MANSC1Q9H8J5 431 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 KANSL2Q9H9L4 492 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 RSL24D1Q9UHA3 163 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 H3BRJ5 948 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 ADAM23O75077 832 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 KRT15P19012 456 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 MAGEA4P43358 317 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TMED10P49755 219 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 BCAP31P51572 246 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 GPC5P78333 572 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 RNF111Q6ZNA4 994 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 PRR11Q96HE9 360 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 NLRP4Q96MN2 994 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 PPP1R10Q96QC0 940 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TBC1D23Q9NUY8 699 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 KCNK4Q9NYG8 393 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
CAPN3-221ENST00000638141 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
CAPN3-221ENST00000638141 H3BNX3 289 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 KLF11O14901 512 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAPN3-221ENST00000638141 COMTP21964 271 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 NCKAP1LP55160 1127 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 CENPCQ03188 943 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 PRKD1Q15139 912 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-221ENST00000638141 TLR1Q15399 786 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SGO2Q562F6 1265 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 TRIM50Q86XT4 487 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-221ENST00000638141 HGH1Q9BTY7 390 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 MKNK1Q9BUB5 465 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 MRPL1Q9BYD6 325 aaKnown RBP12.6□□□□□ -0.39
CAPN3-221ENST00000638141 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 PSMC3IPQ9P2W1 217 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-221ENST00000638141 ADAMTS6Q9UKP5 1117 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SORCS3Q9UPU3 1222 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
CAPN3-221ENST00000638141 ITM2AO43736 263 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 DHRS4L1P0CG22 281 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PEX2P28328 305 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PIK3CAP42336 1068 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 KCNQ4P56696 695 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 BTKQ06187 659 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 MYBPC2Q14324 1141 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PPP1R18Q6NYC8 613 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 LZTR1Q8N653 840 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 CCDC89Q8N998 374 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 EFHD2Q96C19 240 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms