RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 MYLK2Q9H1R3 596 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 GID8Q9NWU2 228 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CRLS1Q9UJA2 301 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 PQBP1O60828 265 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 GLMNQ92990 594 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 EME1Q96AY2 570 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 SNX9Q9Y5X1 595 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 NPC1L1Q9UHC9 1359 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 ERVV-1B6SEH8 477 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 KYNUQ16719 465 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FBXO38Q6PIJ6 1188 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM118BQ9BPY3 351 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 MRPL1Q9BYD6 325 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 IP6K2Q9UHH9 426 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 MYL4P12829 197 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 EIF3EP60228 445 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 RNF44Q7L0R7 432 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 LINC00301Q8NCQ3 95 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 CINPQ9BW66 212 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-258ENST00000638029 STIP1P31948 543 aaKnown RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 CAV1Q03135 178 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SREBF2Q12772 1141 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 HIC1Q14526 733 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SNX17Q15036 470 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 ZNF564Q8TBZ8 553 aaPredicted RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 M0R3G1 203 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 AP3D1O14617 1153 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 NR3C1P04150 777 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 CASP1P29466 404 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 PGM1P36871 562 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SCRN3Q0VDG4 424 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 KLHL38Q2WGJ6 581 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 LONP2Q86WA8 852 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 TMEM143Q96AN5 459 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 PRPF18Q99633 342 aaKnown RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 ELL3Q9HB65 397 aaPredicted RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 ETNK1Q9HBU6 452 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 CYLDQ9NQC7 956 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 OPLAHO14841 1288 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 MAPKAPK2P49137 400 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 TRPC4Q9UBN4 977 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 GMNCA6NCL1 334 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 VAC14Q08AM6 782 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 TFDP2Q14188 446 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 TYW3Q6IPR3 259 aaKnown RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 SERAC1Q96JX3 654 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 STON1Q9Y6Q2 735 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 PTPN7P35236 360 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SFSWAPQ12872 951 aaKnown RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 PRKAB1Q9Y478 270 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 TPP2P29144 1249 aaPredicted RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 CNTN1Q12860 1018 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 PI16Q6UXB8 463 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 LRRC74BQ6ZQY2 392 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 UNC13DQ70J99 1090 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 SPON1Q9HCB6 807 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
CACNA1A-258ENST00000638029 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
CACNA1A-258ENST00000638029 NCAM1P13591 858 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 GRK3P35626 688 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 ACOT2P49753 483 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 TTC23Q5W5X9 447 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 DENND6AQ8IWF6 608 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 LAMC1P11047 1609 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 CPSF4O95639 269 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 UBTFL6P0CB48 400 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 DEFA1P59665 94 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 DEFA3P59666 94 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 NFRKBQ6P4R8 1299 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 PROM2Q8N271 834 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 FAR2Q96K12 515 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 SYBUQ9NX95 663 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 HACL1Q9UJ83 578 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 CLASP1Q7Z460 1538 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 TCOF1Q13428 1488 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 POTEMA6NI47 508 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 COG2Q14746 738 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 DPP10Q8N608 796 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 ARL10Q8N8L6 244 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 TBC1D22BQ9NU19 505 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 AGAP1Q9UPQ3 857 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 TSPAN9O75954 239 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms