RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 B3GALT6Q96L58 329 aa20■□□□□ 0.79
PNKP-224ENST00000631020 KCNH6Q9H252 994 aa20■□□□□ 0.79
PNKP-224ENST00000631020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20■□□□□ 0.792e-7■■■■■ 93.2
PNKP-224ENST00000631020 RAB20Q9NX57 234 aa20■□□□□ 0.79
PNKP-224ENST00000631020 P4HA2O15460 535 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 N4BP1O75113 896 aaKnown RBP19.99■□□□□ 0.79
PNKP-224ENST00000631020 ASS1P00966 412 aaKnown RBP19.99■□□□□ 0.79
PNKP-224ENST00000631020 WEE2P0C1S8 567 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 PNPLA4P41247 253 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 SGSM1Q2NKQ1 1148 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 SPOPLQ6IQ16 392 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
PNKP-224ENST00000631020 HFE2Q6ZVN8 426 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 SUSD3Q96L08 255 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 SENP8Q96LD8 212 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 ZDHHC7Q9NXF8 308 aa19.99■□□□□ 0.79
PNKP-224ENST00000631020 M0QZQ0 153 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 TGM5O43548 720 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 TRAPPC3O43617 180 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 STAU1O95793 577 aaKnown RBP19.98■□□□□ 0.79
PNKP-224ENST00000631020 ATICP31939 592 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 MYO1EQ12965 1108 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 SV2CQ496J9 727 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 OTOP3Q7RTS5 596 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 UBALD2Q8IYN6 164 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 LNX1Q8TBB1 728 aaPredicted RBP19.98■□□□□ 0.79
PNKP-224ENST00000631020 ACSF2Q96CM8 615 aaPredicted RBP19.98■□□□□ 0.79
PNKP-224ENST00000631020 ZNF560Q96MR9 790 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 CRACR2AQ9BSW2 395 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 VRTNQ9H8Y1 702 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 APOBEC3GQ9HC16 384 aaKnown RBP19.98■□□□□ 0.79
PNKP-224ENST00000631020 GDAP2Q9NXN4 497 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 SORCS3Q9UPU3 1222 aa19.98■□□□□ 0.79
PNKP-224ENST00000631020 R3HCC1Q9Y3T6 440 aaKnown RBP19.98■□□□□ 0.79
PNKP-224ENST00000631020 CCDC195A0A1B0GUA6 201 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 TMEM221A6NGB7 291 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 M0R296 226 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 FGFR3P22607 806 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 TPM4P67936 248 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 ZNF699Q32M78 642 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 WDR72Q3MJ13 1102 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 DSTYKQ6XUX3 929 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 EHBP1Q8NDI1 1231 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 ANKRD20A12PQ8NF67 263 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 NAP1L5Q96NT1 182 aaPredicted RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 POLIQ9UNA4 740 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 PES1O00541 588 aaKnown RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 SP100P23497 879 aaPredicted RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 PAX3P23760 479 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 TKTP29401 623 aaKnown RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 PLA2G5P39877 138 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 FANCCQ00597 558 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 KCNMA1Q12791 1236 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 MTMR3Q13615 1198 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 PSMD5Q16401 504 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 PRSS55Q6UWB4 352 aaPredicted RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 PALB2Q86YC2 1186 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 TAF4BQ92750 862 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 TATDN2Q93075 761 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 CLSTN3Q9BQT9 956 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 WDR6Q9NNW5 1121 aaKnown RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 TIMM13Q9Y5L4 95 aaPredicted RBP19.97■□□□□ 0.79
PNKP-224ENST00000631020 SNX9Q9Y5X1 595 aa19.97■□□□□ 0.79
PNKP-224ENST00000631020 MUC6Q6W4X9 2439 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 GTPBP10A4D1E9 387 aaKnown RBP19.96■□□□□ 0.79
PNKP-224ENST00000631020 LGALS16A8MUM7 142 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 CYB561D2O14569 222 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 SLC9A1P19634 815 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 LIMS2Q7Z4I7 341 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 CEP57Q86XR8 500 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 KREMEN2Q8NCW0 462 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 ZNF707Q96C28 371 aaPredicted RBP19.96■□□□□ 0.79
PNKP-224ENST00000631020 RTN4Q9NQC3 1192 aaKnown RBP19.96■□□□□ 0.79
PNKP-224ENST00000631020 NXF1Q9UBU9 619 aaKnown RBP19.96■□□□□ 0.79
PNKP-224ENST00000631020 FBXW11Q9UKB1 542 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 PCDHB8Q9UN66 801 aa19.96■□□□□ 0.79
PNKP-224ENST00000631020 ZMYND10O75800 440 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 RPL17P18621 184 aaKnown RBP19.95■□□□□ 0.78
PNKP-224ENST00000631020 NOP14P78316 857 aaKnown RBP19.95■□□□□ 0.78
PNKP-224ENST00000631020 APBA1Q02410 837 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 CETN1Q12798 172 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 LRMPQ12912 555 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 SOWAHAQ2M3V2 549 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 ZNF667Q5HYK9 610 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 WSCD1Q658N2 575 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 DPY19L2P1Q6NXN4 242 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 RTL10Q7L3V2 364 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 FAM122AQ96E09 287 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 ASIC4Q96FT7 647 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 INTS2Q9H0H0 1204 aaKnown RBP19.95■□□□□ 0.78
PNKP-224ENST00000631020 GCNT4Q9P109 453 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 MTRRQ9UBK8 725 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 L1RE1Q9UN81 338 aa19.95■□□□□ 0.78
PNKP-224ENST00000631020 A0A1B0GTH6 734 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 TEX33O43247 280 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 RFPL2O75678 378 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 SERPINC1P01008 464 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 CYP11A1P05108 521 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 TPM2P07951 284 aa19.94■□□□□ 0.78
PNKP-224ENST00000631020 PON1P27169 355 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms