RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 NRAPQ86VF7 1730 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ALG1L2C9J202 215 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 H3BUI4 141 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 PDPK1O15530 556 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 KCNQ3O43525 872 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 TLR2O60603 784 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DNAJB5O75953 348 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CCNDBP1O95273 360 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 POLR2MP0CAP2 368 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 KELP23276 732 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ME1P48163 572 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RGS19P49795 217 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CPT1AP50416 773 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 AKR1D1P51857 326 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RNASE9P60153 205 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP11AP98196 1134 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 C2orf54Q08AI8 447 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FCHO2Q0JRZ9 810 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SGO1Q5FBB7 561 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DGKKQ5KSL6 1271 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RNASEH2BQ5TBB1 312 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DUS1LQ6P1R4 473 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DRICH1Q6PGQ1 229 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 OTOP3Q7RTS5 596 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 PLD6Q8N2A8 252 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 LSMEM1Q8N8F7 131 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 HEXDCQ8WVB3 486 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RFKQ969G6 155 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 NYXQ9GZU5 481 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 COG4Q9H9E3 785 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 EBF2Q9HAK2 575 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FBRSL1Q9HCM7 1045 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CD93Q9NPY3 652 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ANLNQ9NQW6 1124 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 PAG1Q9NWQ8 432 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ARHGAP28Q9P2N2 729 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 TRHDEQ9UKU6 1024 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM205CA6NFA0 338 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SMAD9O15198 467 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 HSF2BPO75031 334 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 LARGE1O95461 756 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ASMTLO95671 621 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CHRNB1P11230 501 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP1A3P13637 1013 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 XPAP23025 273 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 MZF1P28698 734 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CD97P48960 835 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 GNAQP50148 359 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 MCL1Q07820 350 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RIPK1Q13546 671 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF674Q2M3X9 581 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ANO4Q32M45 955 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FUT11Q495W5 492 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM209AQ5JX71 171 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 VARS2Q5ST30 1063 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SIGIRRQ6IA17 410 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 LIN54Q6MZP7 749 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ABRAXAS1Q6UWZ7 409 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 TMTC3Q6ZXV5 915 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DHX32Q7L7V1 743 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SESTD1Q86VW0 696 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 DENND6AQ8IWF6 608 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CNTROBQ8N137 903 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ZBTB44Q8NCP5 570 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 LILRB4Q8NHJ6 448 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 GRIN3AQ8TCU5 1115 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 OLFM1Q99784 485 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 INTS2Q9H0H0 1204 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RHBGQ9H310 441 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ALG13Q9NP73 1137 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 LZTFL1Q9NQ48 299 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 IARS2Q9NSE4 1012 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SPASTQ9UBP0 616 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 MBD1Q9UIS9 605 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 APPL1Q9UKG1 709 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FRMPD2Q68DX3 1309 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF831Q5JPB2 1677 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A087WZG4 1122 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 A0A1W2PRG0 241 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 B4E1Z4 1266 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 PLOD2O00469 737 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 HOXC11O43248 304 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 TOMM70O94826 608 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FARP2O94887 1054 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ZNF202O95125 648 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 CFBP00751 764 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 KRT19P08727 400 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 GSTA2P09210 222 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 ZBTB48P10074 688 aaPredicted RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 AXLP30530 894 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 USP14P54578 494 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 HADHBP55084 474 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF4P78317 190 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 XRCC4Q13426 336 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FRG1Q14331 258 aaKnown RBP4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 STARD3Q14849 445 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 FBXO43Q4G163 708 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 TTMPQ5BVD1 217 aa4.07□□□□□ -1.76
R3HDM1-220ENST00000628915 SNX30Q5VWJ9 437 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms