RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SMG7Q92540 1137 aaKnown RBP19.58■□□□□ 0.72
LITAF-220ENST00000620789 ELMO3Q96BJ8 720 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 MRPL45Q9BRJ2 306 aaKnown RBP19.58■□□□□ 0.72
LITAF-220ENST00000620789 INSL5Q9Y5Q6 135 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 P4HA1P13674 534 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 PTMSP20962 102 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 ACAT1P24752 427 aaKnown RBP19.57■□□□□ 0.72
LITAF-220ENST00000620789 SMARCB1Q12824 385 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 CBWD6Q4V339 395 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 INTS6LQ5JSJ4 861 aaKnown RBP19.57■□□□□ 0.72
LITAF-220ENST00000620789 CBWD3Q5JTY5 395 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 CBWD5Q5RIA9 395 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 LRRTM3Q86VH5 581 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 ADHFE1Q8IWW8 467 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 FBXL13Q8NEE6 735 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 PI4K2AQ9BTU6 479 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 PHF7Q9BWX1 381 aaPredicted RBP19.57■□□□□ 0.72
LITAF-220ENST00000620789 POMKQ9H5K3 350 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 SMYD3Q9H7B4 428 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 PIDD1Q9HB75 910 aa19.57■□□□□ 0.72
LITAF-220ENST00000620789 CCL16O15467 120 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 HCRTO43612 131 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 XYLBO75191 536 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 LRG1P02750 347 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 CCDC192P0DO97 292 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 ZP2Q05996 745 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 DUSP4Q13115 394 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 SPOPLQ6IQ16 392 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
LITAF-220ENST00000620789 SCARA5Q6ZMJ2 495 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 TRIM59Q8IWR1 403 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 ATAD1Q8NBU5 361 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 CCDC150Q8NCX0 1101 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 C2orf15Q8WU43 125 aaKnown RBP19.56■□□□□ 0.72
LITAF-220ENST00000620789 UHRF1Q96T88 793 aaPredicted RBP19.56■□□□□ 0.72
LITAF-220ENST00000620789 CRISPLD1Q9H336 500 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 SNX25Q9H3E2 840 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 RAB20Q9NX57 234 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 HSFX1Q9UBD0 423 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 COQ4Q9Y3A0 265 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 DENND4AQ7Z401 1863 aa19.56■□□□□ 0.72
LITAF-220ENST00000620789 LMO2P25791 158 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 GNL1P36915 607 aaPredicted RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 ASPAP45381 313 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 FMO5P49326 533 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 NOP14P78316 857 aaKnown RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 NFE2Q16621 373 aaPredicted RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 TPD52L1Q16890 204 aaPredicted RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 KLHL40Q2TBA0 621 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 OR6B3Q8NGW1 331 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 SPPL2BQ8TCT7 592 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 SEMA4DQ92854 862 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 CNOT6LQ96LI5 555 aaKnown RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 NECAB3Q96P71 396 aaPredicted RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 PKMYT1Q99640 499 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 SYT15Q9BQS2 421 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 APOBEC3GQ9HC16 384 aaKnown RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 WDR6Q9NNW5 1121 aaKnown RBP19.55■□□□□ 0.72
LITAF-220ENST00000620789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.55■□□□□ 0.72
LITAF-220ENST00000620789 TMLHEQ9NVH6 421 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 CDH9Q9ULB4 789 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 YIPF1Q9Y548 306 aa19.55■□□□□ 0.72
LITAF-220ENST00000620789 N4BP1O75113 896 aaKnown RBP19.54■□□□□ 0.72
LITAF-220ENST00000620789 LRRN2O75325 713 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 PDGFRBP09619 1106 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 RAP1GAPP47736 663 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 CDH8P55286 799 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 STX1AQ16623 288 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 IRF2BP1Q8IU81 584 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 TTC9BQ8N6N2 239 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 BCO2Q9BYV7 579 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 NIF3L1Q9GZT8 377 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 THAP9Q9H5L6 903 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 ANO10Q9NW15 660 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 GTF3C4Q9UKN8 822 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 SLC27A5Q9Y2P5 690 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 NME7Q9Y5B8 376 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 PCDHB5Q9Y5E4 795 aa19.54■□□□□ 0.72
LITAF-220ENST00000620789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.54■□□□□ 0.72
LITAF-220ENST00000620789 CLUHO75153 1309 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 MYBPHLA2RUH7 354 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 A8MXQ7 604 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 PMM2O15305 246 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 CDR1P51861 262 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 PSMC1P62191 440 aaKnown RBP19.53■□□□□ 0.72
LITAF-220ENST00000620789 TWF1Q12792 350 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 PLD1Q13393 1074 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 CCDC142Q17RM4 750 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 FAM171BQ6P995 826 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 GRASPQ7Z6J2 395 aaPredicted RBP19.53■□□□□ 0.72
LITAF-220ENST00000620789 FAXDC2Q96IV6 333 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 RPGRIP1Q96KN7 1286 aa19.53■□□□□ 0.72
LITAF-220ENST00000620789 COL25A1Q9BXS0 654 aaPredicted RBP19.53■□□□□ 0.72
LITAF-220ENST00000620789 ABI2Q9NYB9 513 aaPredicted RBP19.53■□□□□ 0.72
LITAF-220ENST00000620789 TTC28Q96AY4 2481 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 BDP1A6H8Y1 2624 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 C19orf67A6NJJ6 358 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 P4HA2O15460 535 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 ATP2C2O75185 946 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms