RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PTPN4P29074 926 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 ATP13A4Q4VNC1 1196 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 PKD2L1Q9P0L9 805 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 CNTN3Q9P232 1028 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
SKP2-209ENST00000620197 KIF3CO14782 793 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 VPS41P49754 854 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 DLGAP5Q15398 846 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TM9SF1O15321 606 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 KCNA2P16389 499 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 GLRA2P23416 452 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ABCD1P33897 745 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 NEK3P51956 506 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 SOX10P56693 466 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 GEMIN4P57678 1058 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 MSS51Q4VC12 460 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 CHSY1Q86X52 802 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 C11orf70Q9BRQ4 267 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 FAM213AQ9BRX8 229 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ACSS3Q9H6R3 686 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ANKFY1Q9P2R3 1169 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 WDR90Q96KV7 1748 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 NDC80O14777 642 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 RGS20O76081 388 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TJP3O95049 919 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TGDSO95455 350 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 KRT10P13645 584 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 EPHB2P29323 1055 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ARSEP51690 589 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 RNASELQ05823 741 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 SETDB1Q15047 1291 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TAF1BQ53T94 588 aaPredicted RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 SCARA3Q6AZY7 606 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TXNRD3NBQ6F5E7 133 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 CYP4F22Q6NT55 531 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 C4orf50Q6ZRC1 276 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 VPS11Q9H270 941 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 ARHGEF4Q9NR80 690 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
SKP2-209ENST00000620197 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
SKP2-209ENST00000620197 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 ATG7O95352 703 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 CBX6O95503 412 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 SLC25A11Q02978 314 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 TBC1D10BQ4KMP7 808 aaPredicted RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 SMC6Q96SB8 1091 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 G3V3G9 751 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 PTDSS1P48651 473 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 ADCY1Q08828 1119 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 DCAF8Q5TAQ9 597 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 APLFQ8IW19 511 aaPredicted RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 ARFGAP1Q8N6T3 406 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 SUPT20HQ8NEM7 779 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 ARMC2Q8NEN0 867 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 CPT1BQ92523 772 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 FRMD8P1Q9BZ68 369 aaPredicted RBP13.78□□□□□ -0.2
SKP2-209ENST00000620197 ZFATQ9P243 1243 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 POLIQ9UNA4 740 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
SKP2-209ENST00000620197 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.2
SKP2-209ENST00000620197 EDN1P05305 212 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 GNA15P30679 374 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.2
SKP2-209ENST00000620197 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 NLRP9Q7RTR0 991 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 FAM83AQ86UY5 434 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 C4orf33Q8N1A6 199 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 ZNF333Q96JL9 665 aa13.77□□□□□ -0.2
SKP2-209ENST00000620197 DGAT1O75907 488 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 GAD2Q05329 585 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 SLC18A2Q05940 514 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 GPS1Q13098 491 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 KRT72Q14CN4 511 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.212e-8■■■■■ 47.1
SKP2-209ENST00000620197 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
SKP2-209ENST00000620197 NRG4Q8WWG1 115 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms