RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TCHHL1Q5QJ38 904 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 FAM102BQ5T8I3 360 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 RBM44Q6ZP01 1051 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 RSPH3Q86UC2 560 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ULK2Q8IYT8 1036 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 RNF168Q8IYW5 571 aaPredicted RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 ZCCHC9Q8N567 271 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 FBXO36Q8NEA4 188 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 TAS1R2Q8TE23 839 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 NAT14Q8WUY8 206 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 PSPC1Q8WXF1 523 aaKnown RBP7.01□□□□□ -1.29
LMO3-235ENST00000616247 PPP2R3CQ969Q6 453 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 APOL6Q9BWW8 343 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 GRIP2Q9C0E4 1043 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 MIS12Q9H081 205 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 GPRC5CQ9NQ84 441 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 ACTL7BQ9Y614 415 aa7.01□□□□□ -1.29
LMO3-235ENST00000616247 UMODL1Q5DID0 1318 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CAMTA1Q9Y6Y1 1673 aa7□□□□□ -1.29
LMO3-235ENST00000616247 KCNQ2O43526 872 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ZMPSTE24O75844 475 aa7□□□□□ -1.29
LMO3-235ENST00000616247 GZMAP12544 262 aa7□□□□□ -1.29
LMO3-235ENST00000616247 TNNI1P19237 187 aa7□□□□□ -1.29
LMO3-235ENST00000616247 PTK7Q13308 1070 aa7□□□□□ -1.29
LMO3-235ENST00000616247 NCOA4Q13772 614 aa7□□□□□ -1.29
LMO3-235ENST00000616247 UBAP2LQ14157 1087 aaKnown RBP7□□□□□ -1.29
LMO3-235ENST00000616247 MYBPC3Q14896 1274 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CYTH1Q15438 398 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CCNG2Q16589 344 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SMTNL2Q2TAL5 461 aa7□□□□□ -1.29
LMO3-235ENST00000616247 PADI6Q6TGC4 694 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SDCCAG8Q86SQ7 713 aaPredicted RBP7□□□□□ -1.29
LMO3-235ENST00000616247 TMPRSS6Q8IU80 811 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ZC3H3Q8IXZ2 948 aaKnown RBP7□□□□□ -1.29
LMO3-235ENST00000616247 GALNT4Q8N4A0 578 aa7□□□□□ -1.29
LMO3-235ENST00000616247 DENND1AQ8TEH3 1009 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SEMA4DQ92854 862 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CD101Q93033 1021 aa7□□□□□ -1.29
LMO3-235ENST00000616247 FAM20AQ96MK3 541 aa7□□□□□ -1.29
LMO3-235ENST00000616247 NACC1Q96RE7 527 aa7□□□□□ -1.29
LMO3-235ENST00000616247 OLFML3Q9NRN5 406 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CICQ96RK0 1608 aaPredicted RBP7□□□□□ -1.29
LMO3-235ENST00000616247 MYOCOSA0A1B0GUC4 107 aa7□□□□□ -1.29
LMO3-235ENST00000616247 E2F8A0AVK6 867 aa7□□□□□ -1.29
LMO3-235ENST00000616247 PRR5-ARHGAP8B1AHC4 643 aa7□□□□□ -1.29
LMO3-235ENST00000616247 DNALI1O14645 258 aaPredicted RBP7□□□□□ -1.29
LMO3-235ENST00000616247 ECE2O60344 883 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SLITRK3O94933 977 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SMARCA1P28370 1054 aa7□□□□□ -1.29
LMO3-235ENST00000616247 BPIFB4P59827 614 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ARHGAP8P85298 464 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ZNF200P98182 395 aaPredicted RBP7□□□□□ -1.29
LMO3-235ENST00000616247 LMNB2Q03252 620 aa7□□□□□ -1.29
LMO3-235ENST00000616247 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
LMO3-235ENST00000616247 CHI3L2Q15782 390 aa7□□□□□ -1.29
LMO3-235ENST00000616247 MFSD7Q6UXD7 560 aa7□□□□□ -1.29
LMO3-235ENST00000616247 TREML1Q86YW5 311 aa7□□□□□ -1.29
LMO3-235ENST00000616247 NUDCD3Q8IVD9 361 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SLF2Q8IX21 1173 aa7□□□□□ -1.29
LMO3-235ENST00000616247 PDIK1LQ8N165 341 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ATP11CQ8NB49 1132 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ICA1LQ8NDH6 482 aa7□□□□□ -1.29
LMO3-235ENST00000616247 OR6Y1Q8NGX8 325 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SHKBP1Q8TBC3 707 aa7□□□□□ -1.29
LMO3-235ENST00000616247 AGR3Q8TD06 166 aa7□□□□□ -1.29
LMO3-235ENST00000616247 GDPD5Q8WTR4 605 aa7□□□□□ -1.29
LMO3-235ENST00000616247 POMGNT1Q8WZA1 660 aa7□□□□□ -1.29
LMO3-235ENST00000616247 BORCS6Q96GS4 357 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CNBD2Q96M20 576 aa7□□□□□ -1.29
LMO3-235ENST00000616247 NR1H4Q96RI1 486 aaPredicted RBP7□□□□□ -1.29
LMO3-235ENST00000616247 P2RX7Q99572 595 aaKnown RBP7□□□□□ -1.29
LMO3-235ENST00000616247 LXNQ9BS40 222 aa7□□□□□ -1.29
LMO3-235ENST00000616247 ZNF577Q9BSK1 485 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SYT11Q9BT88 431 aa7□□□□□ -1.29
LMO3-235ENST00000616247 CD209Q9NNX6 404 aa7□□□□□ -1.29
LMO3-235ENST00000616247 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
LMO3-235ENST00000616247 KANSL3Q9P2N6 904 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SLC7A8Q9UHI5 535 aa7□□□□□ -1.29
LMO3-235ENST00000616247 TDRKHQ9Y2W6 561 aaKnown RBP7□□□□□ -1.29
LMO3-235ENST00000616247 AK5Q9Y6K8 562 aa7□□□□□ -1.29
LMO3-235ENST00000616247 RPS6KL1Q9Y6S9 549 aa7□□□□□ -1.29
LMO3-235ENST00000616247 COMMD3-BMI1R4GMX3 469 aa7□□□□□ -1.29
LMO3-235ENST00000616247 SIGLEC16A6NMB1 481 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 MEIS2O14770 477 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 EIF3DO15371 548 aaKnown RBP eCLIP6.99□□□□□ -1.29
LMO3-235ENST00000616247 CFLARO15519 480 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 PRPF4O43172 522 aaKnown RBP eCLIP6.99□□□□□ -1.29
LMO3-235ENST00000616247 CYP1A2P05177 515 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 C6orf222P0C671 652 aaPredicted RBP6.99□□□□□ -1.29
LMO3-235ENST00000616247 PEX2P28328 305 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 NRLP54845 237 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 AQP4P55087 323 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 INHBCP55103 352 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 PPP4CP60510 307 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 FAAP100Q0VG06 881 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 DLG1Q12959 904 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 PEX6Q13608 980 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 BMPR2Q13873 1038 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 PSMD6Q15008 389 aa6.99□□□□□ -1.29
LMO3-235ENST00000616247 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms