RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ARHGAP9Q9BRR9 750 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
CNTNAP3B-211ENST00000612828 STRNO43815 780 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM107AO95990 144 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TMEM11P17152 192 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RAB2AP61019 212 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 NEK8Q86SG6 692 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LPIN2Q92539 896 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCMTD2Q9NV79 361 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PADI4Q9UM07 663 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MYOM2P54296 1465 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SUN1O94901 812 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RB1P06400 928 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TUBBP07437 444 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PHKG2P15735 406 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 STAT1P42224 750 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PLCD1P51178 756 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 FAM160B1Q5W0V3 765 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MMGT1Q8N4V1 131 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MROH8Q9H579 483 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 YEATS2Q9ULM3 1422 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SYNMO15061 1565 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SOWAHDA6NJG2 315 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 VPS4BO75351 444 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ALDH1B1P30837 517 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 LSP1P33241 339 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TBRG1Q3YBR2 411 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C1orf189Q5VU69 101 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TERB1Q8NA31 727 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SRP68Q9UHB9 627 aaKnown RBP11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CCDC189A1A4V9 331 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PDE8AO60658 829 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SERPINB1P30740 379 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GRIK1P39086 918 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GYG1P46976 350 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ITIH6Q6UXX5 1313 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CASP1P29466 404 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RBL2Q08999 1139 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PLD1Q13393 1074 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 HLA-DQA1Q5Y7H0 255 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TREML1Q86YW5 311 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RASGEF1AQ8N9B8 481 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PARD6BQ9BYG5 372 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 GIT1Q9Y2X7 761 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PSMD9O00233 223 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MPOP05164 745 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 QARSP47897 775 aaKnown RBP11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CDKL1Q00532 357 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TFAP4Q01664 338 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RABGAP1LQ5R372 815 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SNAP47Q5SQN1 464 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MIR1-1HGQ9H1L0 117 aa11.28□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CFAP99D6REC4 459 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 DCLK1O15075 740 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MYBL1P10243 752 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ALDH9A1P49189 494 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MTSS1LQ765P7 747 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RASGRP4Q8TDF6 673 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 THAP11Q96EK4 314 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MSANTD3Q96H12 275 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 CUEDC2Q9H467 287 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCDH18Q9HCL0 1135 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 IKBKBO14920 756 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 RBM6P78332 1123 aaKnown RBP11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 ZNF284Q2VY69 593 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SYCP2LQ5T4T6 812 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MASTLQ96GX5 879 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 MAML3Q96JK9 1138 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 SPACA6W5XKT8 324 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCDH11XQ9BZA7 1347 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCDH11YQ9BZA8 1340 aa11.27□□□□□ -0.6
CNTNAP3B-211ENST00000612828 PCNAP12004 261 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TCN1P20061 433 aaPredicted RBP11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 HNF1BP35680 557 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FUT11Q495W5 492 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 GARNL3Q5VVW2 1013 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PLEKHA7Q6IQ23 1121 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 OR2L5Q8NG80 312 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 TMEM168Q9H0V1 697 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 PSMD14O00487 310 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 FAM20BO75063 409 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 IL1AP01583 271 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 ATF4P18848 351 aaPredicted RBP11.27□□□□□ -0.61
CNTNAP3B-211ENST00000612828 EXOSC10Q01780 885 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms