RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TFR2Q9UP52 801 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 STXBP5LQ9Y2K9 1186 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 M0QZQ0 153 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 CFHP08603 1231 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ALDH7A1P49419 539 aaKnown RBP18.67■□□□□ 0.58
SREK1-216ENST00000612404 BTG3Q14201 252 aaPredicted RBP18.67■□□□□ 0.58
SREK1-216ENST00000612404 SGO2Q562F6 1265 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 OSTM1Q86WC4 334 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 METTL23Q86XA0 190 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 TNS4Q8IZW8 715 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 C12orf29Q8N999 325 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ZSWIM1Q9BR11 485 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 DNAI2Q9GZS0 605 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 DPEP3Q9H4B8 488 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 TAS2R14Q9NYV8 317 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
SREK1-216ENST00000612404 ARHGEF37A1IGU5 675 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 MED7O43513 233 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 TRAPPC3O43617 180 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 GALTP07902 379 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 FAM163BP0C2L3 166 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 BCAR1P56945 870 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 REXO1L1PQ8IX06 675 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 ZBED2Q9BTP6 218 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 DDX43Q9NXZ2 648 aaKnown RBP18.66■□□□□ 0.58
SREK1-216ENST00000612404 DSEQ9UL01 958 aa18.66■□□□□ 0.58
SREK1-216ENST00000612404 VDRP11473 427 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 ACAT1P24752 427 aaKnown RBP18.65■□□□□ 0.58
SREK1-216ENST00000612404 LHX1P48742 406 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 VAV2P52735 878 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 CWH43Q9H720 699 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 KCND1Q9NSA2 647 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 FAM49BQ9NUQ9 324 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 KIAA1257Q9ULG3 409 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 GABRDO14764 452 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 ARHGAP29Q52LW3 1261 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 C10orf76Q5T2E6 689 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 HERVK_113Q902F9 699 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 CYFIP2Q96F07 1278 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 TNIP3Q96KP6 325 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 PACSIN1Q9BY11 444 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 RC3H2Q9HBD1 1191 aaKnown RBP18.65■□□□□ 0.58
SREK1-216ENST00000612404 NENFQ9UMX5 172 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 PCDHB8Q9UN66 801 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 SLC4A7Q9Y6M7 1214 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 COL4A6Q14031 1691 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 PTPRSQ13332 1948 aa18.65■□□□□ 0.58
SREK1-216ENST00000612404 RCCD1A6NED2 376 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 PSMC1P62191 440 aaKnown RBP18.64■□□□□ 0.57
SREK1-216ENST00000612404 CLEC16AQ2KHT3 1053 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 CMTR2Q8IYT2 770 aaKnown RBP18.64■□□□□ 0.57
SREK1-216ENST00000612404 MARCH5Q9NX47 278 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 NR2E3Q9Y5X4 410 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 GJB5O95377 273 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 CYP11A1P05108 521 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 KIF5AQ12840 1032 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 NAA35Q5VZE5 725 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 OVOS1Q6IE37 1185 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 TRIM72Q6ZMU5 477 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 TMEM173Q86WV6 379 aaPredicted RBP18.64■□□□□ 0.57
SREK1-216ENST00000612404 CRYBG2Q8N1P7 616 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 TXLNBQ8N3L3 684 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 CPA5Q8WXQ8 436 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 LACRTQ9GZZ8 138 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 CEP83Q9Y592 693 aa18.64■□□□□ 0.57
SREK1-216ENST00000612404 SF3B1O75533 1304 aaKnown RBP eCLIP18.63■□□□□ 0.577e-10■■■■□ 23
SREK1-216ENST00000612404 GOLGA6L9A6NEM1 432 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 ATP2C2O75185 946 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 RTN2O75298 545 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 FTLP02792 175 aaPredicted RBP18.63■□□□□ 0.57
SREK1-216ENST00000612404 H2AFZP0C0S5 128 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 GZMAP12544 262 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 ABCB4P21439 1286 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 TKTP29401 623 aaKnown RBP18.63■□□□□ 0.57
SREK1-216ENST00000612404 PPP1R26Q5T8A7 1209 aaPredicted RBP18.63■□□□□ 0.57
SREK1-216ENST00000612404 FAM171A1Q5VUB5 890 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 H2AFVQ71UI9 128 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 CEP57Q86XR8 500 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 B3GALNT2Q8NCR0 500 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
SREK1-216ENST00000612404 TRIM10Q9UDY6 481 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 PCDHGC3Q9UN70 934 aa18.63■□□□□ 0.57
SREK1-216ENST00000612404 MRPL42Q9Y6G3 142 aaKnown RBP18.63■□□□□ 0.57
SREK1-216ENST00000612404 O00370 1275 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 ABL1P00519 1130 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 CYP1A1P04798 512 aaPredicted RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 TYMPP19971 482 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 PCSK1P29120 753 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 YWHAHQ04917 246 aaPredicted RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 CNGA2Q16280 664 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 DENND1BQ6P3S1 775 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 FUT10Q6P4F1 479 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 GPR62Q9BZJ7 368 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 TSPAN16Q9UKR8 245 aa18.62■□□□□ 0.57
SREK1-216ENST00000612404 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.62■□□□□ 0.57
SREK1-216ENST00000612404 RANBP2P49792 3224 aaKnown RBP18.62■□□□□ 0.57
SREK1-216ENST00000612404 TSC2P49815 1807 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms