RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 CNGA4Q8IV77 575 aa4.23□□□□□ -1.73
CCDC144B-206ENST00000609959 CNTD1Q8N815 330 aa4.23□□□□□ -1.73
CCDC144B-206ENST00000609959 ACTRT3Q9BYD9 372 aa4.23□□□□□ -1.73
CCDC144B-206ENST00000609959 TDP1Q9NUW8 608 aa4.23□□□□□ -1.73
CCDC144B-206ENST00000609959 TRIM75PA6NK02 468 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 TISP43B9A030 160 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 PRR23D1E9PI22 279 aaPredicted RBP4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 QSOX1O00391 747 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 SOCS2O14508 198 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 NDUFS2O75306 463 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 RHOP08100 348 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 PRR23D2P0DMB1 279 aaPredicted RBP4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 ZNF280AP59817 542 aaPredicted RBP4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 TBCCQ15814 346 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 INAVAQ3KP66 663 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 FLYWCH1Q4VC44 716 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 PGM2L1Q6PCE3 622 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 CATSPERGQ6ZRH7 1159 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 MIGA2Q7L4E1 593 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 AMOTL1Q8IY63 956 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 CBARPQ8N350 705 aaPredicted RBP4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 GALNT16Q8N428 558 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 SMRP1Q8NCR6 262 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 POC1BQ8TC44 478 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 ADAMTS15Q8TE58 950 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 JADE3Q92613 823 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 TMX3Q96JJ7 454 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 SLC45A2Q9UMX9 530 aa4.22□□□□□ -1.73
CCDC144B-206ENST00000609959 SMIM35A0A1B0GVV1 85 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 POLRMTO00411 1230 aaKnown RBP4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 C5AR1P21730 350 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 SCP2P22307 547 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 IARSP41252 1262 aaKnown RBP4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 IL10RAQ13651 578 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 KIAA1161Q6NSJ0 714 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 MIS18BP1Q6P0N0 1132 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 WDR53Q7Z5U6 358 aaPredicted RBP4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 C1orf162Q8NEQ5 155 aaPredicted RBP4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 IFI44Q8TCB0 444 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 REPS1Q96D71 796 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 LRIG1Q96JA1 1093 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 AMBRA1Q9C0C7 1298 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA12O60330 932 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 EDNRBP24530 442 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 ZNF134P52741 427 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 CDC42EP1Q00587 391 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 GTF2H3Q13889 308 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 TWIST1Q15672 202 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 C3orf36Q3SXR2 165 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 ZNF618Q5T7W0 954 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 DDX42Q86XP3 938 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 TMIEQ8NEW7 156 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PIGOQ8TEQ8 1089 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 SSH1Q8WYL5 1049 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 FAM136AQ96C01 138 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PUS7Q96PZ0 661 aaKnown RBP4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 DMRTA2Q96SC8 542 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 SLC5A4Q9NY91 659 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 LIMCH1Q9UPQ0 1083 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 IPPQ9Y573 584 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA9Q9Y5G4 932 aaKnown RBP4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA8Q9Y5G5 932 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA7Q9Y5G6 932 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA6Q9Y5G7 932 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 PCDHGA3Q9Y5H0 932 aa4.2□□□□□ -1.74
CCDC144B-206ENST00000609959 CCDC187A0A096LP49 1063 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 HTRA2O43464 458 aaPredicted RBP4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 CLSTN1O94985 981 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 MT-CO1P00395 513 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 FGBP02675 491 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 TMEM191BP0C7N4 346 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 ITGALP20701 1170 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 EEFSECP57772 596 aaKnown RBP4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 RAB39AQ14964 217 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 DAZAP2Q15038 168 aaPredicted RBP4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 EGFLAMQ63HQ2 1017 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 SLC30A10Q6XR72 485 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 GADL1Q6ZQY3 521 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 NANOGP1Q8N7R0 232 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 PNLDC1Q8NA58 520 aaKnown RBP4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 FBXO41Q8TF61 875 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 SCAMP4Q969E2 229 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 FAXDC2Q96IV6 333 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 MRGPRX4Q96LA9 322 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 ASB2Q96Q27 587 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 SIK2Q9H0K1 926 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 MAN1C1Q9NR34 630 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 TRNAU1APQ9NX07 287 aaKnown RBP4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 MKS1Q9NXB0 559 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 DKK3Q9UBP4 350 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 AFG3L2Q9Y4W6 797 aa4.19□□□□□ -1.74
CCDC144B-206ENST00000609959 SGTAO43765 313 aa4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 NHLRC4P0CG21 123 aaPredicted RBP4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 SFPQP23246 707 aaKnown RBP eCLIP4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 CD6P30203 668 aa4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 ARHGAP25P42331 645 aa4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 HOXA4Q00056 320 aaPredicted RBP4.18□□□□□ -1.74
CCDC144B-206ENST00000609959 ACAP2Q15057 778 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms