RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
CCDC144B-206ENST00000609959 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
CCDC144B-206ENST00000609959 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
CCDC144B-206ENST00000609959 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
CCDC144B-206ENST00000609959 FOXD1Q16676 465 aa20.32■□□□□ 0.84
CCDC144B-206ENST00000609959 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
CCDC144B-206ENST00000609959 MSH5O43196 834 aa19.18■□□□□ 0.66
CCDC144B-206ENST00000609959 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
CCDC144B-206ENST00000609959 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
CCDC144B-206ENST00000609959 ADRA2BP18089 450 aa18.85■□□□□ 0.61
CCDC144B-206ENST00000609959 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
CCDC144B-206ENST00000609959 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
CCDC144B-206ENST00000609959 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
CCDC144B-206ENST00000609959 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
CCDC144B-206ENST00000609959 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
CCDC144B-206ENST00000609959 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
CCDC144B-206ENST00000609959 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
CCDC144B-206ENST00000609959 HOXD11P31277 338 aaPredicted RBP16.63■□□□□ 0.25
CCDC144B-206ENST00000609959 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
CCDC144B-206ENST00000609959 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
CCDC144B-206ENST00000609959 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
CCDC144B-206ENST00000609959 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
CCDC144B-206ENST00000609959 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
CCDC144B-206ENST00000609959 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
CCDC144B-206ENST00000609959 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
CCDC144B-206ENST00000609959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC144B-206ENST00000609959 KCNA4P22459 653 aa15.55■□□□□ 0.08
CCDC144B-206ENST00000609959 U3KPZ7 1027 aaPredicted RBP15.46■□□□□ 0.07
CCDC144B-206ENST00000609959 CAPN15O75808 1086 aa15.34■□□□□ 0.05
CCDC144B-206ENST00000609959 APLP2Q06481 763 aa15.26■□□□□ 0.03
CCDC144B-206ENST00000609959 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
CCDC144B-206ENST00000609959 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
CCDC144B-206ENST00000609959 DSG3P32926 999 aa15.2■□□□□ 0.02
CCDC144B-206ENST00000609959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
CCDC144B-206ENST00000609959 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
CCDC144B-206ENST00000609959 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
CCDC144B-206ENST00000609959 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
CCDC144B-206ENST00000609959 SAMD1Q6SPF0 538 aaPredicted RBP15.04■□□□□ -0
CCDC144B-206ENST00000609959 ABCB7O75027 752 aa14.9□□□□□ -0.02
CCDC144B-206ENST00000609959 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
CCDC144B-206ENST00000609959 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
CCDC144B-206ENST00000609959 POTEHQ6S545 545 aa14.73□□□□□ -0.05
CCDC144B-206ENST00000609959 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
CCDC144B-206ENST00000609959 POLA2Q14181 598 aa14.62□□□□□ -0.07
CCDC144B-206ENST00000609959 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
CCDC144B-206ENST00000609959 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
CCDC144B-206ENST00000609959 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
CCDC144B-206ENST00000609959 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
CCDC144B-206ENST00000609959 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
CCDC144B-206ENST00000609959 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
CCDC144B-206ENST00000609959 ZBTB22O15209 634 aa14.21□□□□□ -0.13
CCDC144B-206ENST00000609959 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
CCDC144B-206ENST00000609959 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
CCDC144B-206ENST00000609959 FBLN2P98095 1184 aa14.02□□□□□ -0.17
CCDC144B-206ENST00000609959 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
CCDC144B-206ENST00000609959 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
CCDC144B-206ENST00000609959 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
CCDC144B-206ENST00000609959 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
CCDC144B-206ENST00000609959 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
CCDC144B-206ENST00000609959 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC144B-206ENST00000609959 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
CCDC144B-206ENST00000609959 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
CCDC144B-206ENST00000609959 HAX1O00165 279 aa13.72□□□□□ -0.21
CCDC144B-206ENST00000609959 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
CCDC144B-206ENST00000609959 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
CCDC144B-206ENST00000609959 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
CCDC144B-206ENST00000609959 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
CCDC144B-206ENST00000609959 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
CCDC144B-206ENST00000609959 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
CCDC144B-206ENST00000609959 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC144B-206ENST00000609959 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
CCDC144B-206ENST00000609959 EVX2Q03828 476 aa13.39□□□□□ -0.27
CCDC144B-206ENST00000609959 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CCDC144B-206ENST00000609959 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
CCDC144B-206ENST00000609959 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
CCDC144B-206ENST00000609959 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
CCDC144B-206ENST00000609959 GABBR2O75899 941 aa13.18□□□□□ -0.3
CCDC144B-206ENST00000609959 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
CCDC144B-206ENST00000609959 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
CCDC144B-206ENST00000609959 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
CCDC144B-206ENST00000609959 CLCN6P51797 869 aa13.11□□□□□ -0.31
CCDC144B-206ENST00000609959 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
CCDC144B-206ENST00000609959 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
CCDC144B-206ENST00000609959 LHX8Q68G74 356 aa12.93□□□□□ -0.34
CCDC144B-206ENST00000609959 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
CCDC144B-206ENST00000609959 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC144B-206ENST00000609959 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
CCDC144B-206ENST00000609959 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.34
CCDC144B-206ENST00000609959 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
CCDC144B-206ENST00000609959 PROM2Q8N271 834 aa12.73□□□□□ -0.37
CCDC144B-206ENST00000609959 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
CCDC144B-206ENST00000609959 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
CCDC144B-206ENST00000609959 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
CCDC144B-206ENST00000609959 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
CCDC144B-206ENST00000609959 MIER1Q8N108 512 aa12.59□□□□□ -0.39
CCDC144B-206ENST00000609959 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
CCDC144B-206ENST00000609959 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
CCDC144B-206ENST00000609959 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
CCDC144B-206ENST00000609959 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
CCDC144B-206ENST00000609959 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms