RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TEKT4Q8WW24 435 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 FAM118BQ9BPY3 351 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 MANSC1Q9H8J5 431 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.54■■□□□ 1.361e-7■■■■□ 21.7
SHANK2-220ENST00000608988 ZNF212Q9UDV6 495 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 USTQ9Y2C2 406 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 FARP1Q9Y4F1 1045 aaPredicted RBP23.54■■□□□ 1.36
SHANK2-220ENST00000608988 PCDHAC2Q9Y5I4 1007 aa23.54■■□□□ 1.36
SHANK2-220ENST00000608988 H0Y3Z8 333 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 ICAM1P05362 532 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 DSG3P32926 999 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 CDK16Q00536 496 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 KRT76Q01546 638 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 ZACNQ401N2 412 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 SNX30Q5VWJ9 437 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 CC2D2BQ6DHV5 1058 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 NLRX1Q86UT6 975 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 PPIL6Q8IXY8 311 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GALNT15Q8N3T1 639 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 MZB1Q8WU39 189 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 SKA1Q96BD8 255 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 CSRNP1Q96S65 589 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 PAPOLBQ9NRJ5 636 aaKnown RBP23.53■■□□□ 1.36
SHANK2-220ENST00000608988 KANSL3Q9P2N6 904 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 STX18Q9P2W9 335 aaKnown RBP23.53■■□□□ 1.36
SHANK2-220ENST00000608988 KCNG1Q9UIX4 513 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 POLIQ9UNA4 740 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 EME2A4GXA9 379 aaPredicted RBP23.53■■□□□ 1.36
SHANK2-220ENST00000608988 WDR64B1ANS9 1081 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GYG2O15488 501 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 EXTL3O43909 919 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 PDHA1P08559 390 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 TBXAS1P24557 533 aaPredicted RBP23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GCLCP48506 637 aaPredicted RBP23.53■■□□□ 1.36
SHANK2-220ENST00000608988 ARFIP2P53365 341 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GPX6P59796 221 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 AP1B1Q10567 949 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GSTA3Q16772 222 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 GLIS1Q8NBF1 620 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 ACER1Q8TDN7 264 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 SYT15Q9BQS2 421 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 PI4K2AQ9BTU6 479 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 CCDC28BQ9BUN5 200 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 TCEAL9Q9UHQ7 104 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 SNCAIPQ9Y6H5 919 aa23.53■■□□□ 1.36
SHANK2-220ENST00000608988 hCG_1818297A0A087WSY0 165 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 TMEM191CA6NGB0 347 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 E7ESA3 106 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 PSMG1O95456 288 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 HLA-DRAP01903 254 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 CALB1P05937 261 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 TMEM191BP0C7N4 346 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 FGFR1P11362 822 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 ADRA1DP25100 572 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 MTMR1Q13613 665 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 RCN1Q15293 331 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 PLEKHG4Q58EX7 1191 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 TFDP3Q5H9I0 405 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 CCDC62Q6P9F0 684 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 MFSD7Q6UXD7 560 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 PYROXD1Q8WU10 500 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 MCUR1Q96AQ8 359 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 TSSK1BQ9BXA7 367 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 PKD2L1Q9P0L9 805 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 HEY2Q9UBP5 337 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 CLUHO75153 1309 aa23.52■■□□□ 1.36
SHANK2-220ENST00000608988 DHRS4L1P0CG22 281 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 GNA15P30679 374 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 SPP2Q13103 211 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 CUL2Q13617 745 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 CIAPIN1Q6FI81 312 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 LRRC74BQ6ZQY2 392 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 PHLDB2Q86SQ0 1253 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 VPS52Q8N1B4 723 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 TTC13Q8NBP0 860 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 SLC35B2Q8TB61 432 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 STMN2Q93045 179 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 C8orf37Q96NL8 207 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 FAM192AQ9GZU8 254 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 ARL8BQ9NVJ2 186 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 CPSF2Q9P2I0 782 aaKnown RBP23.51■■□□□ 1.35
SHANK2-220ENST00000608988 KLHL33A6NCF5 533 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 ZSCAN5DPP0CG00 497 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 GLRA2P23416 452 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 GJC1P36383 396 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 UGCGQ16739 394 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 OR52E8Q6IFG1 317 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 LLGL2Q6P1M3 1020 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 RFWD2Q8NHY2 731 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 TCP10LQ8TDR4 215 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 IFT43Q96FT9 208 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 PAFAH2Q99487 392 aa23.51■■□□□ 1.35
SHANK2-220ENST00000608988 MAGEA13PA6NCF6 341 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 F8W8V4 182 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 DKC1O60832 514 aaKnown RBP eCLIP23.5■■□□□ 1.359e-8■■■□□ 15.9
SHANK2-220ENST00000608988 LSM8O95777 96 aaKnown RBP23.5■■□□□ 1.35
SHANK2-220ENST00000608988 CALCAP01258 141 aa23.5■■□□□ 1.35
SHANK2-220ENST00000608988 C4BPAP04003 597 aaKnown RBP23.5■■□□□ 1.35
SHANK2-220ENST00000608988 ATP5BP06576 529 aaKnown RBP23.5■■□□□ 1.35
SHANK2-220ENST00000608988 KRT10P13645 584 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms