RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 AARSP49588 968 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 CLCNKBP51801 687 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 DSG1Q02413 1049 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 COLEC11Q9BWP8 271 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 PDE11AQ9HCR9 933 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 LARSQ9P2J5 1176 aaKnown RBP11.32□□□□□ -0.6
LINC01001-203ENST00000607448 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 MUTYHQ9UIF7 546 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 TSC2P49815 1807 aa11.32□□□□□ -0.6
LINC01001-203ENST00000607448 MACROD2A1Z1Q3 448 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 TISP43B9A030 160 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 H3BQF6 201 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 K7ENM7 598 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ZNF263O14978 683 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 TADA2AO75478 443 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 MCF2P10911 925 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 TNFSF9P41273 254 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SMTNP53814 917 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 STRN3Q13033 797 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ASTE1Q2TB18 679 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-203ENST00000607448 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SFMBT2Q5VUG0 894 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SLC39A4Q6P5W5 647 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SPATA31D4Q6ZUB0 917 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 EEF2KMTQ96G04 330 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 SNX27Q96L92 541 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 TCHPQ9BT92 498 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 PHF7Q9BWX1 381 aaPredicted RBP11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ZHX3Q9H4I2 956 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
LINC01001-203ENST00000607448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01001-203ENST00000607448 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 DOCK8Q8NF50 2099 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 I3L4J1 428 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 CETN3O15182 167 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 EPHB6O15197 1021 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 TOM1L1O75674 476 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 FAM13AO94988 1023 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 HOXB8P17481 243 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 ANXA13P27216 316 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 BRCC3P46736 316 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 UPP1Q16831 310 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 TMC5Q6UXY8 1006 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 RIN2Q8WYP3 895 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 C18orf25Q96B23 403 aaPredicted RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 FBXL18Q96ME1 805 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 TBX20Q9UMR3 447 aa11.3□□□□□ -0.6
LINC01001-203ENST00000607448 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01001-203ENST00000607448 TECTAO75443 2155 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 ADAM12O43184 909 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 FAM189A1O60320 539 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 RFPL2O75678 378 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 CLSTN1O94985 981 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 PLEKP08567 350 aaPredicted RBP11.29□□□□□ -0.6
LINC01001-203ENST00000607448 CXCL8P10145 99 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 PAFAH1B1P43034 410 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 YARSP54577 528 aaKnown RBP11.29□□□□□ -0.6
LINC01001-203ENST00000607448 MCL1Q07820 350 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 C10orf76Q5T2E6 689 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 FRMD5Q7Z6J6 570 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
LINC01001-203ENST00000607448 KCNN1Q92952 543 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 ACAP3Q96P50 834 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 LRFN3Q9BTN0 628 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 LSM14BQ9BX40 385 aaKnown RBP11.29□□□□□ -0.6
LINC01001-203ENST00000607448 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
LINC01001-203ENST00000607448 ADAM21Q9UKJ8 722 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms