RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 FOXC1Q12948 553 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 RUNX3Q13761 415 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 TRIM29Q14134 588 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 NOLC1Q14978 699 aaKnown RBP eCLIP14.49□□□□□ -0.099e-12■■□□□ 12.5
CTSA-212ENST00000606394 VEPH1Q14D04 833 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 SH3PXD2AQ5TCZ1 1133 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 LARP1BQ659C4 914 aaKnown RBP14.49□□□□□ -0.09
CTSA-212ENST00000606394 TCEAL6Q6IPX3 200 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 ARMCX5Q6P1M9 558 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 TAS1R3Q7RTX0 852 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 GPIHBP1Q8IV16 184 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 GATA6Q92908 595 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 TCEAL3Q969E4 200 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 TSPAN18Q96SJ8 248 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 KMT5AQ9NQR1 393 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 GKN1Q9NS71 199 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 TUBGCP4Q9UGJ1 667 aa14.49□□□□□ -0.09
CTSA-212ENST00000606394 GCN1Q92616 2671 aaKnown RBP14.49□□□□□ -0.09
CTSA-212ENST00000606394 SMG1Q96Q15 3661 aaKnown RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 SRRM3A6NNA2 597 aaPredicted RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 GIPC1O14908 333 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 RNF40O75150 1001 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 APBB3O95704 486 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 OR4Q2P0C623 313 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 HOXB3P14651 431 aaPredicted RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 DDX6P26196 483 aaKnown RBP eCLIP14.48□□□□□ -0.09
CTSA-212ENST00000606394 OVOS1Q6IE37 1185 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 LRSAM1Q6UWE0 723 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 CMTM8Q8IZV2 173 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 ATAD1Q8NBU5 361 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 NSUN7Q8NE18 718 aaKnown RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 CCDC26Q8TAB7 109 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 ACDQ96AP0 544 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 NTPCRQ9BSD7 190 aaKnown RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 KIF9Q9HAQ2 790 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 POLD4Q9HCU8 107 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 TMEM9BQ9NQ34 198 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 HPS4Q9NQG7 708 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 SLC27A5Q9Y2P5 690 aa14.48□□□□□ -0.09
CTSA-212ENST00000606394 TIMM13Q9Y5L4 95 aaPredicted RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 SETXQ7Z333 2677 aaKnown RBP14.48□□□□□ -0.09
CTSA-212ENST00000606394 ATG2BQ96BY7 2078 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 KHNYNO15037 678 aaKnown RBP14.47□□□□□ -0.09
CTSA-212ENST00000606394 CLTAP09496 248 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 AVPR1AP37288 418 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
CTSA-212ENST00000606394 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
CTSA-212ENST00000606394 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
CTSA-212ENST00000606394 MCL1Q07820 350 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 SMARCB1Q12824 385 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 STRN3Q13033 797 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 ZBTB6Q15916 424 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 ZPBP2Q6X784 338 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 DSTYKQ6XUX3 929 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 DAW1Q8N136 415 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 ANP32BQ92688 251 aaKnown RBP14.47□□□□□ -0.09
CTSA-212ENST00000606394 CHFRQ96EP1 664 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 HHIPQ96QV1 700 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 TIPINQ9BVW5 301 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 SLC46A2Q9BY10 475 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 IL21Q9HBE4 155 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 UBQLN1Q9UMX0 589 aaKnown RBP14.47□□□□□ -0.09
CTSA-212ENST00000606394 KIAA1024Q9UPX6 916 aa14.47□□□□□ -0.09
CTSA-212ENST00000606394 NUP205Q92621 2012 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 TTC26A0AVF1 554 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 CLDN3O15551 220 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 EGFP01133 1207 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 ODC1P11926 461 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 HARSP12081 509 aaKnown RBP14.46□□□□□ -0.09
CTSA-212ENST00000606394 UBE2HP62256 183 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 PDIA5Q14554 519 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 PDGFRLQ15198 375 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 SAFBQ15424 915 aaKnown RBP eCLIP14.46□□□□□ -0.09
CTSA-212ENST00000606394 ECM1Q16610 540 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 KYAT1Q16773 422 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 GAS2L3Q86XJ1 694 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 TTC9BQ8N6N2 239 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 C2orf15Q8WU43 125 aaKnown RBP14.46□□□□□ -0.09
CTSA-212ENST00000606394 P2RY13Q9BPV8 354 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 EBF3Q9H4W6 596 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 ANKFY1Q9P2R3 1169 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 TBX20Q9UMR3 447 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 NEUROG3Q9Y4Z2 214 aa14.46□□□□□ -0.09
CTSA-212ENST00000606394 ASCC3Q8N3C0 2202 aaKnown RBP14.45□□□□□ -0.1
CTSA-212ENST00000606394 OTOL1A6NHN0 477 aaPredicted RBP14.45□□□□□ -0.1
CTSA-212ENST00000606394 HIP1RO75146 1068 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 CXCL8P10145 99 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 LILRA4P59901 499 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 KRT85P78386 507 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 CYP4F8P98187 520 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 BFSP1Q12934 665 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 DMC1Q14565 340 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 ZNF268Q14587 947 aaPredicted RBP14.45□□□□□ -0.1
CTSA-212ENST00000606394 TAF12Q16514 161 aa14.45□□□□□ -0.1
CTSA-212ENST00000606394 USP39Q53GS9 565 aaKnown RBP14.45□□□□□ -0.1
CTSA-212ENST00000606394 PMS2CLQ68D20 193 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms