RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 KIAA0355O15063 1070 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 THAP12O43422 761 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 P4HA1P13674 534 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 VSNL1P62760 191 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 NOMO2Q5JPE7 1267 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 TMCO2Q7Z6W1 182 aaPredicted RBP18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 VPS36Q86VN1 386 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 OSTM1Q86WC4 334 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 UBN1Q9NPG3 1134 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 ALPK3Q96L96 1907 aa18.46■□□□□ 0.55
PPFIA3-207ENST00000602716 TIMP1P01033 207 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 TUSC3Q13454 348 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 SV2CQ496J9 727 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 PAPD7Q5XG87 772 aaKnown RBP18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 DPEP3Q9H4B8 488 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 GDAP2Q9NXN4 497 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 DNAJB4Q9UDY4 337 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 COL4A6Q14031 1691 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 MACROD2A1Z1Q3 448 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 ACRP10323 421 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 PNPLA4P41247 253 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 LIMS2Q7Z4I7 341 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 FAXDC2Q96IV6 333 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 CASD1Q96PB1 797 aa18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 BARX2Q9UMQ3 279 aaPredicted RBP18.45■□□□□ 0.54
PPFIA3-207ENST00000602716 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 KIF4AO95239 1232 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ATP1A1P05023 1023 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CD19P15391 556 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ABCB4P21439 1286 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 BRCC3P46736 316 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 YWHAEP62258 255 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 DSC1Q08554 894 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 WDR93Q6P2C0 686 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CNKSR3Q6P9H4 555 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ZNF606Q8WXB4 792 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ARHGEF26Q96DR7 871 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ELAC1Q9H777 363 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 TIMM13Q9Y5L4 95 aaPredicted RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 ENC1O14682 589 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 PJA2O43164 708 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 KRT86O43790 486 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 RAG1P15918 1043 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 LMO2P25791 158 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CDR1P51861 262 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 GALCP54803 685 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 C2CD6Q53TS8 623 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 NAA35Q5VZE5 725 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 WSCD1Q658N2 575 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CYFIP2Q96F07 1278 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 TMEM176AQ96HP8 235 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 PCDHB7Q9Y5E2 793 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 SAR1BQ9Y6B6 198 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 CAPN6Q9Y6Q1 641 aa18.44■□□□□ 0.54
PPFIA3-207ENST00000602716 MICAL3Q7RTP6 2002 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 CYB561D2O14569 222 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 BPIFB4P59827 614 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 DEFB103AP81534 67 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 TIGD5Q53EQ6 642 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 LLGL2Q6P1M3 1020 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 ACOT1Q86TX2 421 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 ADGRF2Q8IZF7 708 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 C12orf29Q8N999 325 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 CPA5Q8WXQ8 436 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 SENP8Q96LD8 212 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 THAP2Q9H0W7 228 aa18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 TDRD15B5MCY1 1934 aaKnown RBP18.43■□□□□ 0.54
PPFIA3-207ENST00000602716 BUB1O43683 1085 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 B3GAT3O94766 335 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 UPP2O95045 317 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 MOCS3O95396 460 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 CYP1A1P04798 512 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 UNGP13051 313 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 AARSP49588 968 aaKnown RBP eCLIP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 NOMO3P69849 1222 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 KIF5AQ12840 1032 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 DENND1BQ6P3S1 775 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 DPH6Q7L8W6 267 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 COLGALT2Q8IYK4 626 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 TXLNBQ8N3L3 684 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 OR6B3Q8NGW1 331 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 URGCPQ8TCY9 931 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 ISCUQ9H1K1 167 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 LRFN2Q9ULH4 789 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 PRG3Q9Y2Y8 225 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 TTC3P53804 2025 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 FTLP02792 175 aaPredicted RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 PAEPP09466 180 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 PDGFRBP09619 1106 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 H2AFZP0C0S5 128 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 RPL9P32969 192 aaKnown RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 PBX3P40426 434 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 GPS2Q13227 327 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 MFSD5Q6N075 450 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 H2AFVQ71UI9 128 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 ZNF677Q86XU0 584 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms