RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SMARCB1Q12824 385 aa18.78■□□□□ 0.6
IRF3-230ENST00000601809 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
IRF3-230ENST00000601809 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
IRF3-230ENST00000601809 ADGRF2Q8IZF7 708 aa18.78■□□□□ 0.6
IRF3-230ENST00000601809 C2orf15Q8WU43 125 aaKnown RBP18.78■□□□□ 0.6
IRF3-230ENST00000601809 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
IRF3-230ENST00000601809 CORO1BQ9BR76 489 aa18.78■□□□□ 0.6
IRF3-230ENST00000601809 RPP25Q9BUL9 199 aaKnown RBP18.78■□□□□ 0.6
IRF3-230ENST00000601809 DDX43Q9NXZ2 648 aaKnown RBP18.78■□□□□ 0.6
IRF3-230ENST00000601809 NARSO43776 548 aaKnown RBP18.77■□□□□ 0.6
IRF3-230ENST00000601809 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
IRF3-230ENST00000601809 COL9A1P20849 921 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 BMP6P22004 513 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 WARSP23381 471 aaKnown RBP18.77■□□□□ 0.6
IRF3-230ENST00000601809 NR2F2P24468 414 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 AP3M2P53677 418 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 MYL6P60660 151 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 ENPEPQ07075 957 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 EDRF1Q3B7T1 1238 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 ZACNQ401N2 412 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 INTS6LQ5JSJ4 861 aaKnown RBP18.77■□□□□ 0.6
IRF3-230ENST00000601809 FAM171BQ6P995 826 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 PARM1Q6UWI2 310 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 SPPL2BQ8TCT7 592 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 ING5Q8WYH8 240 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 PSMG2Q969U7 264 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 RMND1Q9NWS8 449 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 RAPGEFL1Q9UHV5 662 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 MRPS23Q9Y3D9 190 aaKnown RBP18.77■□□□□ 0.6
IRF3-230ENST00000601809 NUMBLQ9Y6R0 609 aa18.77■□□□□ 0.6
IRF3-230ENST00000601809 DENND4CQ5VZ89 1909 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 OBSL1O75147 1896 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 TACC1O75410 805 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 PDGFBP01127 241 aaPredicted RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 FAM163BP0C2L3 166 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 FCARP24071 287 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 ACAT1P24752 427 aaKnown RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 LMO2P25791 158 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 ATICP31939 592 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 LHX1P48742 406 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 CDR1P51861 262 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 PMS1P54277 932 aaKnown RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 PLD1Q13393 1074 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 DCP1BQ8IZD4 617 aaKnown RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 ST13P5Q8NFI4 369 aaPredicted RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 ZNF512Q96ME7 567 aaPredicted RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 MRPL45Q9BRJ2 306 aaKnown RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 ZNF334Q9HCZ1 680 aaPredicted RBP18.76■□□□□ 0.59
IRF3-230ENST00000601809 GDE1Q9NZC3 331 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 ASB3Q9Y575 518 aa18.76■□□□□ 0.59
IRF3-230ENST00000601809 COL4A2P08572 1712 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 GREB1Q4ZG55 1949 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
IRF3-230ENST00000601809 IKBKBO14920 756 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 TUFMP49411 452 aaKnown RBP18.75■□□□□ 0.59
IRF3-230ENST00000601809 MYL7Q01449 175 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 GAREM2Q75VX8 874 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 SV2AQ7L0J3 742 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 LEMD2Q8NC56 503 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 SHKBP1Q8TBC3 707 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 SMARCE1Q969G3 411 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 IL21Q9HBE4 155 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 CRTAC1Q9NQ79 661 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 MAN1B1Q9UKM7 699 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 GTF3C4Q9UKN8 822 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 ZDBF2Q9HCK1 2354 aa18.75■□□□□ 0.59
IRF3-230ENST00000601809 MYBPHLA2RUH7 354 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 ZNF197O14709 1029 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 ATP2C2O75185 946 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 SMC2O95347 1197 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
IRF3-230ENST00000601809 ALDH1A3P47895 512 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 VAMP7P51809 220 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 EPHB3P54753 998 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 TSPY1Q01534 308 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 ADAM9Q13443 819 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 NFE2Q16621 373 aaPredicted RBP18.74■□□□□ 0.59
IRF3-230ENST00000601809 WDR72Q3MJ13 1102 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 IQCEQ6IPM2 695 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 CLEC17AQ6ZS10 378 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 PDZD4Q76G19 769 aaPredicted RBP18.74■□□□□ 0.59
IRF3-230ENST00000601809 DNAJB7Q7Z6W7 309 aaPredicted RBP18.74■□□□□ 0.59
IRF3-230ENST00000601809 ELMOD1Q8N336 334 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 MCRS1Q96EZ8 462 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 LPIN3Q9BQK8 851 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 ASAH2Q9NR71 780 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 FRMD4BQ9Y2L6 1034 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 PCDHB5Q9Y5E4 795 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 NCANO14594 1321 aa18.74■□□□□ 0.59
IRF3-230ENST00000601809 NUP210Q8TEM1 1887 aaPredicted RBP18.73■□□□□ 0.59
IRF3-230ENST00000601809 KINO60870 393 aaKnown RBP18.73■□□□□ 0.59
IRF3-230ENST00000601809 SRFP11831 508 aa18.73■□□□□ 0.59
IRF3-230ENST00000601809 HMGA1P17096 107 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms