RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ACAT1P24752 427 aaKnown RBP15.36■□□□□ 0.05
LIG1-208ENST00000595758 LMO2P25791 158 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 CDH8P55286 799 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 ITIH3Q06033 890 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 UVSSAQ2YD98 709 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 PPM1LQ5SGD2 360 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 TMC5Q6UXY8 1006 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 SCARA5Q6ZMJ2 495 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 RTL10Q7L3V2 364 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 TCEAL8Q8IYN2 117 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 CMASQ8NFW8 434 aaPredicted RBP15.36■□□□□ 0.05
LIG1-208ENST00000595758 OR6B3Q8NGW1 331 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 PGLYRP2Q96PD5 576 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 NIF3L1Q9GZT8 377 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 CYP4F11Q9HBI6 524 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 APOBEC3GQ9HC16 384 aaKnown RBP15.36■□□□□ 0.05
LIG1-208ENST00000595758 ZDHHC7Q9NXF8 308 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 FAM50BQ9Y247 325 aa15.36■□□□□ 0.05
LIG1-208ENST00000595758 PLXNA3P51805 1871 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 GRXCR2A6NFK2 248 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 KCNJ18B7U540 433 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 MBTPS2O43462 519 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 HCRTO43612 131 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 SEC24AO95486 1093 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 HNRNPA1P09651 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIG1-208ENST00000595758 ASPAP45381 313 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 RAP1GAPP47736 663 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 KCNQ1P51787 676 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 MYL5Q02045 173 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 SMARCB1Q12824 385 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 KCNJ12Q14500 433 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 INTS6LQ5JSJ4 861 aaKnown RBP15.35■□□□□ 0.05
LIG1-208ENST00000595758 ATAT1Q5SQI0 421 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 GPR149Q86SP6 731 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 ATAD1Q8NBU5 361 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 SYT15Q9BQS2 421 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 PRKD2Q9BZL6 878 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 SDCBP2Q9H190 292 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 CDH9Q9ULB4 789 aa15.35■□□□□ 0.05
LIG1-208ENST00000595758 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
LIG1-208ENST00000595758 TSC2P49815 1807 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 MTMR11A4FU01 709 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 A8MXQ7 604 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 ATP2C2O75185 946 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 VNN2O95498 520 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 WEE2P0C1S8 567 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 EEF1GP26641 437 aaKnown RBP15.34■□□□□ 0.05
LIG1-208ENST00000595758 HOXA9P31269 272 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 CDR1P51861 262 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 DUSP4Q13115 394 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 NFE2Q16621 373 aaPredicted RBP15.34■□□□□ 0.05
LIG1-208ENST00000595758 MAN2A1Q16706 1144 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 ZSCAN23Q3MJ62 389 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 CYP26C1Q6V0L0 522 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 C2orf15Q8WU43 125 aaKnown RBP15.34■□□□□ 0.05
LIG1-208ENST00000595758 SUSD6Q92537 303 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 SMG7Q92540 1137 aaKnown RBP15.34■□□□□ 0.05
LIG1-208ENST00000595758 TATDN2Q93075 761 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 FAXDC2Q96IV6 333 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 RIPOR3Q96MK2 946 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 TUBGCP2Q9BSJ2 902 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 FUCA2Q9BTY2 467 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 BCO2Q9BYV7 579 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 PIDD1Q9HB75 910 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 TMLHEQ9NVH6 421 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 FANCLQ9NW38 375 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 GTF3C4Q9UKN8 822 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 SLC27A5Q9Y2P5 690 aa15.34■□□□□ 0.05
LIG1-208ENST00000595758 MTCL1Q9Y4B5 1905 aaKnown RBP15.33■□□□□ 0.05
LIG1-208ENST00000595758 MYBPHLA2RUH7 354 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 XYLBO75191 536 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 PAPLNO95428 1278 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 BMP1P13497 986 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
LIG1-208ENST00000595758 MTHFRP42898 656 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 PSMC1P62191 440 aaKnown RBP15.33■□□□□ 0.04
LIG1-208ENST00000595758 LRMPQ12912 555 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 TCP11X2Q5H9J9 407 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 CDKAL1Q5VV42 579 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 FAM171BQ6P995 826 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 EHBP1Q8NDI1 1231 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 FEZF2Q8TBJ5 459 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 ZNF707Q96C28 371 aaPredicted RBP15.33■□□□□ 0.04
LIG1-208ENST00000595758 NECTIN4Q96NY8 510 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 PKMYT1Q99640 499 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 BPIFA3Q9BQP9 254 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
LIG1-208ENST00000595758 CDH22Q9UJ99 828 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 NME7Q9Y5B8 376 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 PCDHB5Q9Y5E4 795 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 INSL5Q9Y5Q6 135 aa15.33■□□□□ 0.04
LIG1-208ENST00000595758 CCL16O15467 120 aa15.32■□□□□ 0.04
LIG1-208ENST00000595758 LRG1P02750 347 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms